Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1800 ATGGCGTTGTGCAAACGCGCTTTTCATTTGTGCTCCAACCATCGTCTCTGCCTGGCCAAGTATCGCGACCTCGATTATGTTGTCCCTTCTATGACGTTGCAGAGTAGCAGGCACCTTTCGCAGGCCATGAACTCCAACCTAAAGCGCGCGTTCCTCGTCGACACACTTGCGCTGGTAAGGGGTTTAGAGGCTAAAGGAGTTCCGTCCAAACAAGCCGAAGCGATAACTTCTGCAATCACCCAAGTTCTTAATGATAGTTTGGAAAATGTAGTTAATTCGTTTGTTTCAAAGATCGAAATGCAAAAGTCAGAGGTACTTCAAGAATCGAGTCTGTCCAAGTTCAAATCTGAAGTGCAAAGTTCTCAGGAGCATCATTTTTCTCTGTTGCAACGTGAGACCGAGAAGCTTCGTGGTGACATTGAGAAGATGAGAAGTGAAATGAGATACGAGATTGACAAAGTCACTGCTGGACAACGTCTAGACCTGAATCTTGAAAGAGGACGCATACGTGATGAGCTTGCTAATCAGAACGCTGAAACCTCCAGTTTGACAAACAAACTCGATCGGGAAATTCATGAATTAAGAGCCCACGTAGAAGCTGCAAAGTATGATGTGATCAAATACTGCATAGGTACTCTTGTTTCCATATCTGCAGTGGGTCTCGCTGTAATCCGCATCATATTATAG 687 0.4483 MALCKRAFHLCSNHRLCLAKYRDLDYVVPSMTLQSSRHLSQAMNSNLKRAFLVDTLALVRGLEAKGVPSKQAEAITSAITQVLNDSLENVVNSFVSKIEMQKSEVLQESSLSKFKSEVQSSQEHHFSLLQRETEKLRGDIEKMRSEMRYEIDKVTAGQRLDLNLERGRIRDELANQNAETSSLTNKLDREIHELRAHVEAAKYDVIKYCIGTLVSISAVGLAVIRIIL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1800 228 PANTHER UNCHARACTERIZED 29 228 IPR024461 -
Vra5g1800 228 Pfam Coiled-coil domain-containing protein 90-like 53 226 IPR024461 -
Vra5g1800 228 Gene3D - 54 155 - -
Vra5g1800 228 PANTHER FMP32-LIKE PROTEIN 29 228 - -
Vra5g1800 228 Coils Coil 126 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1800 Vra-Chr5 24033801 24038810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1800 - - rcu:8284365 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1800 5 24033801 24038810 Vra5g1800 5 24033801 24038810 ECH