Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1786 ATGGGTGCTGCTTGTTGTGTTGCTGCCAGAGACAAAACTATACAAAGTGGATCAACCAGTGACATTTTGCACCGAAATGTTCGGTGTTCTCCAACATGGAGCTTTCGGTGGGATCACCGAGGGCGTGTAGCTGGTGAAGATATTTCTATAAATTGGTTTTCTGATGGTATTAGCAGAAATGATGGATCGGAGAATAAAAATGAATCAGCATATGTGTCAGAGGACGGCAGTCCATTGCAGAATTATCAACGGAAAAGATTCCAACAGTCTCCAATTTCGGAAGCAACTGCTGTACGTGGGAGAAATTCAACATCAGACCAATCTTTTTCGGGGACTGTTTCTACGGATATGAGTGTGGAACAGGTGAATGGGCTGGTGGAATCATCAACAATATCTTGTCCATCTCCCACAAAACCATCACTGCCTTCAACATCACTATCAACATCTCCTCTAGCATCCCTATGTCACATACCTCCATCAAACTTGACCCCTGTAAGGTGGCCTTGCCATTCCCCAGGATACCAGTTATCACAGCAAGCTTCTGATAGCCGAATTCCAGCAGTCAAGTCATCAAGCAGCTTCTCTCTGTCTGAAGAAAGGCCAGTATTTCCTTCATGGAACAATGACGTGGGTATGCGCGGTGGATCTTCAGATGGTTGGTCTATACCTGGTTTTTCTGAGCTGATGGGAACTCCTCACAAAGAAAGGTGGTCATTTGATAGTGAGTCCTTTGGTTTTAACCGGGAAAGATTAGTTAGATCCAGTAGTTGGTTTTCAGCTTCATCAGTTGATTTGCAATCATGTGGAATTTGCTCTAAACTTTTAGCGGAGAAGTCCTCTTGGAGCACTCAAAAGATAATTGCGAGTAATGATCTTTCTGTAGTTTCTGTACTTATCTGCGGACATGTCTATCACGCTGAATGTTTGGAGAGAATGACATCTGATATCAATAAGTATGATCCAGCTTGTCCAGTTTGCACTTTCGGTGAAAAACAAACTATGAAGTTGTCTGCAAAGGCCCTGAAAGCTGAAATGGATTTGAAGGCTAGAAACAATAAATCAAAGAATCGGAATGTGGACAGTGATATTGACGATGATTCTGTTGTGTTTGATGGCTTTAAAGGTAAATGTCCTAGGAATGACTCCAGTTCCAGCAGGAGAAGCTCCTTTGGGAAACCATTTTTGCGGCGACACTTCTCCTTTGGATCAAAAGGTCCCAGATCCATGTTAGATAATCACCCTACAAGAAAGAAGGGTTTCTTTTGGGCCAAATCTAGCAAGGAATAA 1287 0.4281 MGAACCVAARDKTIQSGSTSDILHRNVRCSPTWSFRWDHRGRVAGEDISINWFSDGISRNDGSENKNESAYVSEDGSPLQNYQRKRFQQSPISEATAVRGRNSTSDQSFSGTVSTDMSVEQVNGLVESSTISCPSPTKPSLPSTSLSTSPLASLCHIPPSNLTPVRWPCHSPGYQLSQQASDSRIPAVKSSSSFSLSEERPVFPSWNNDVGMRGGSSDGWSIPGFSELMGTPHKERWSFDSESFGFNRERLVRSSSWFSASSVDLQSCGICSKLLAEKSSWSTQKIIASNDLSVVSVLICGHVYHAECLERMTSDINKYDPACPVCTFGEKQTMKLSAKALKAEMDLKARNNKSKNRNVDSDIDDDSVVFDGFKGKCPRNDSSSSRRSSFGKPFLRRHFSFGSKGPRSMLDNHPTRKKGFFWAKSSKE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1786 428 MobiDBLite consensus disorder prediction 405 428 - -
Vra5g1786 428 PANTHER BNAA09G43140D PROTEIN 1 422 - -
Vra5g1786 428 MobiDBLite consensus disorder prediction 129 149 - -
Vra5g1786 428 MobiDBLite consensus disorder prediction 94 115 - -
Vra5g1786 428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 328 IPR013083 -
Vra5g1786 428 MobiDBLite consensus disorder prediction 410 428 - -
Vra5g1786 428 PANTHER EXPRESSED PROTEIN 1 422 - -
Vra5g1786 428 SUPERFAMILY RING/U-box 267 327 - -
Vra5g1786 428 ProSiteProfiles Zinc finger RING-type profile. 268 327 IPR001841 -
Vra5g1786 428 MobiDBLite consensus disorder prediction 56 79 - -
Vra5g1786 428 SMART ring_2 268 326 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1786 Vra-Chr5 23915641 23920448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1786 - - gmx:100778123 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1786 5 23915641 23920448 Vra5g1786 5 23915641 23920448 ECH