Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1780 ATGGAAACAGTTCAATTTATTTTCGCTAATGGTGGAGCTGGAGAAGCAAGCTATGCAAACAATTCCTCCTTTCAAAGTAAGATGATATCAAAAGTGAAACCCATCCTCGAAGAAAGTATGAAGTCCCTGTACTGCAACTCTGTCCCGAGCTGTTTCAGAGTGGCTGATCTGGGTTGTTCTTCGGGACCAAATGCACTTCAGGTGGCGTATGATATTATCGATGTTGTTCACAACATCAGTCGCAGCTATAACCGTGAGCCACCCATCACATTCCAAATTTACCTCAACGATCAATTTCAAAACGATTTCAACAACATCTTTGAGGCCCTACCTTGCTTCTACGAGAGGCTACGAGAAGAAAAGGGAGAGGGATTTGGTGCATGTTTCGTCAATGCAACGCCCGGAAGCTTTTATGGGAGACTCTTCCCGACCAATTCCATGCACTTTTTTCACTCTTCCACCAGTCTCCATTGGCTCTCTCAGGCTCCGAAAGGATTGATTAACAAGGAAAACATTTACTTCACTAACACGAGCCCATGCACGGTGTACCAAGCTTACCTCGATCAGTTCAGTGAAGATTTCAATCTGTTTCTAAAATCACGAGCGGAGGAACTAGTGCATGGTGGTGGTATGGTTCTAACATTTGTTGGCAGAGATGAAACTTCCGACATAATCACTCCTTGGGGGTTAATTGGTTTGGTTCTGAATGACATGGTTTTGGAGAGTTTGATTGAAGAGGGAAAGTTGGAGTCCGTTAATATGCCAAGATATGGTCCTACTGCTAATGAAGTTAAGCAATTGATTGATGCAGAAGGGTGTTTTACTCTTCAAAAGTTGGAGACATTCAAGTCGAGATGGGATGAAGGCTTGAAAGAAAATGGTAACGGTGATTTGGCTTTAGATGTAAATGTCAGAGCCAATTTCATAGCCAAATACGTGAGAGCTACTACTGAACCTTTTCTGACTTCACGGTTTGGAGAAGGTATAATCGATGAATTATTCCTTAGATTCCGAAAGAAAGTTGGCAAACTGTTGGAGGAACAAAAATTAGAGTATACTTATCTGGTCATGTTCATCACAAAAAAGTGA 1089 0.4197 METVQFIFANGGAGEASYANNSSFQSKMISKVKPILEESMKSLYCNSVPSCFRVADLGCSSGPNALQVAYDIIDVVHNISRSYNREPPITFQIYLNDQFQNDFNNIFEALPCFYERLREEKGEGFGACFVNATPGSFYGRLFPTNSMHFFHSSTSLHWLSQAPKGLINKENIYFTNTSPCTVYQAYLDQFSEDFNLFLKSRAEELVHGGGMVLTFVGRDETSDIITPWGLIGLVLNDMVLESLIEEGKLESVNMPRYGPTANEVKQLIDAEGCFTLQKLETFKSRWDEGLKENGNGDLALDVNVRANFIAKYVRATTEPFLTSRFGEGIIDELFLRFRKKVGKLLEEQKLEYTYLVMFITKK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1780 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 362 IPR029063 -
Vra5g1780 362 Gene3D Vaccinia Virus protein VP39 21 349 IPR029063 -
Vra5g1780 362 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 9 361 - -
Vra5g1780 362 Pfam SAM dependent carboxyl methyltransferase 39 361 IPR005299 GO:0008168
Vra5g1780 362 Gene3D - 9 348 IPR042086 -
Vra5g1780 362 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 9 361 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1780 Vra-Chr5 23868313 23870027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1780 - K21483 vun:114164464 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1780 5 23868313 23870027 Vra5g1780 5 23868313 23870027 ECH