Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1771 ATGGAGGGAAGTGGCGGTGGCGGTGGCGCTGCTCCGTCGTCTGCGCCGGTGAAGCAATATCTGCAGGAGTTCTCTAAGCTGTTTCAGTACTATCTGGACAAATCTACCCCCCATTCCGCCTACAGATGGATTGGGACGTTGGTCATGGCATCCATCTACGTCTTGCGTATTGTTTACGTGCAGGGGTTTTACGTTGTCTCTTACGGCCTCGGAATCTACCTCCTCAATCTCTTGATTGGTTTTCTCTCACCTTTGGTTGATCCAGAGCTCGATCCCTCCAACTCCCCTTTGCTTCCCACCAAAGGATCCGATGAGTTCAAACCCTTCATTCGCCGCCTCCCTGAGTTTAAGTTCTGGTATTCTTTCACCAAGGCCCTCTGCATAGCGTTTGTGATGACCTTCTTTTCCCCGTTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGTTTGTTCTCTTCGTCCTTACAATGAGGCGCCAAGTTGCACACATGATCAAATACAAATATATCCCATTTAACTTGGGGAAGCAGAAGTATACTGGTAAGAAATCTTCTGCAGGTAGCAGTGGCTCTCGAGCAGACTGA 591 0.4856 MEGSGGGGGAAPSSAPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVMASIYVLRIVYVQGFYVVSYGLGIYLLNLLIGFLSPLVDPELDPSNSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSPFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYTGKKSSAGSSGSRAD* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1771 196 PANTHER PROTEIN RER1 2 191 IPR004932 GO:0016021
Vra5g1771 196 PIRSF AtER_Rer1p 8 192 IPR004932 GO:0016021
Vra5g1771 196 Pfam Rer1 family 21 182 IPR004932 GO:0016021
Vra5g1771 196 PANTHER PROTEIN RER1A 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1771 Vra-Chr5 23831823 23834268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1771 1 196 Miscellaneous Gene Families AT2G21600 73.096 5.21e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1771 - - gmx:100499765 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1771 5 23831823 23834268 Vra5g1771 5 23831823 23834268 ECH