Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1770 ATGGCAGGGAATAGCAGCAAGAGCAAGATTCTGTTCATCGGAGGCACTGGTTACACCGGAAAATTCCTGGTGGAGGCGAGTGCCAGAGCTGGCCACCCAACCTTCCTTTTGGTGAGGGAGTCCACTCTCTCCAACCCTGCAAAATCTTCCCTCATTCACAACTTCCAAAGCCTTGGTGTCAACATTGTTTTCGGAGATTTATACGATTACCAAAGTTTGTTGAATGCGATAAAGCAGGTAGATGTGGTCTTTTCTACAGTACCACGCTCGCATCTAGCTGAGCAAGATAACATCATTTCTGCAATAAAAGAAGCAGGAAATGTTAAGAAATTCTATCCATCTGAGTTTGGACATGATGTGGATCGAAATCATGCAGTCGAACCGGCGACTATTGCATATGCAAAGAAGGCCAAAATTCGTCGAACTATTGAGGCTGAAGGAATTCCTTACACTTATGTGTCATGTAACTTCTTTGATGGTCACTTCCTATCAACCTTGTCGCAACCTGGAGCTACAACTCCTCCTAGAGACAAAATTATTATCCTAGGAAATGGAAATCCCAAAGCTGTTTTCAATAAGGAAGAGGATGTTGCTACTTACACAATCAATTCAGTGGATGATCCAAGAACTTTGAACAAAATTCTGTACATTAGACCTCCCAACAACACGTTGTCGTTTAATGAACTTGTTACCCTTTGGGAGAAGAAGATTAGTAAAACTCTTGAAAGAATCTACGTTCCAGAAGAACAAGTACTAAAGCAGATCCAAGAGTCTTCACCACCCTTGAATATTTTATTGGCATTTAAACACGCTGCTTACGTAAAAGGTGACCATGCTAACTTTGAAATTGAGTCTTCTTTTGGAGTGGAAGCTTCAGCTTTATATCCTGATGTGAAATACACCACAGTGGATGACTATCTTAATAACCTTGTGTGA 936 0.4124 MAGNSSKSKILFIGGTGYTGKFLVEASARAGHPTFLLVRESTLSNPAKSSLIHNFQSLGVNIVFGDLYDYQSLLNAIKQVDVVFSTVPRSHLAEQDNIISAIKEAGNVKKFYPSEFGHDVDRNHAVEPATIAYAKKAKIRRTIEAEGIPYTYVSCNFFDGHFLSTLSQPGATTPPRDKIIILGNGNPKAVFNKEEDVATYTINSVDDPRTLNKILYIRPPNNTLSFNELVTLWEKKISKTLERIYVPEEQVLKQIQESSPPLNILLAFKHAAYVKGDHANFEIESSFGVEASALYPDVKYTTVDDYLNNLV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1770 311 Gene3D - 9 297 - -
Vra5g1770 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 259 IPR036291 -
Vra5g1770 311 Gene3D - 157 307 - -
Vra5g1770 311 Pfam NmrA-like family 10 300 IPR008030 -
Vra5g1770 311 CDD PCBER_SDR_a 9 306 IPR045312 GO:0016491
Vra5g1770 311 PANTHER PINORESINOL REDUCTASE-RELATED 6 310 - -
Vra5g1770 311 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 6 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1770 Vra-Chr5 23827356 23830010 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1770 K23050 - gmx:548027 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1770 5 23827356 23830010 Vra5g1770 5 23827356 23830010 ECH