Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1755 ATGGAGGCGTTAATCGAGTTATGCGACCTCATTGCGAAGAATCCGTCGCAATTCTCCGACAAGCTTTCTTGGATATGCGGTAAATGTCCTCCGCCGGAGTACCTAACGGCGGGATCTCCTAGGGTTTCGCGCTCTCAGCTCAATGCCGTCCTCGCCGTTTCGCGCTTCCTCTCCAAGTGCCCCGATTCTGCCGATCTGCGCCCAAAGTCCGTCGTCGTCGAGTTTCTACGCTCCGTTCCCAATTCCTTCACTCAGTCCTTCTGGCCGCACCCTTTCAACGCCGATTCCGTGACCTCTTTTTTCGTCGATTTCACCGGCTACGTCTCCAAGGCCGCGAAAGCGTCGCTGGATTTTGCCGAGGAGCTCACTGCCTTCGCCGGCGAAGTAATCATTTCCGCGATCGGCGAACCCCGCTCCAGCATTGCTAGGGCTTTCTTGGCTGGTGTGTCGCAGAACTATATCCCAATTTCGTCATCCGATGCCAACAGATTGGTGACTTGTTTAATCGATCAATTCTCCGCGCATACTATTTCTGTTGCATGCACTCCGAGGGAACTGCTCATTGCGGAAAATTCATCGTCTCAGAGCTCGCCCATCAGTGTAAACCACCAACCCCTGACCAATTACAATGACAGTCCCGGGAATGAGAATACTTCGGGTTCCTCGAGCAGTGTGGCTTCTAAGGCTGCGGAAGATGGTAGTACGGCGTCCTCGAGAGGAGTGGTGAACGGCCCCCACCATGTTTATAGGTCCAGTGCTGATCTATTGGCTCTGAATTTGGGTTTAAATGATGGTAATCTTGGACCAATCTCGTCTTCCCAGCAAGTTATTTCCTTCGAGGAAGAGTCTGTGGAGTTCTTAGAGAGGCAGGAAATAGCTTTTAACTTGATTGCTCACGTGCTGGAAAATGTCCACATCGAGTCCGGACTTTTGGAGCAGGTTAGGTTAATTGGGAAGAAGCAAATACAGTCCTTGTCTGTTTTTCTGAAGATCAGGAAGAGGGATTGGCATGAGCAGGGGTCACTTTTAAAAGCGAGGATTAATACGAAACTTTCAGTTTATAAAGCTGCAGTGAACCTGAAAATCAAGAGCCTCTCGGCACTGGATTCTGATTCAAGGTCTGTTAAGAGGTTGGTTTATGAGGCAGTTGCAATTTTAATAGATGCTGCTGAGGCATGCTTACTCTCTGGATGGCGTAAGTTGAGATCGTGTGAAGAGCTCTTCGATTCATTGCTTCTAGGGGTAGGACAAATTGCTATTGCTCGAGGAGGACAGCCGCTGCGCATTTTGCTCATTCGCCTAAAGCCAATTGTTCTCAATGTCTGCGCTCAGCCTGATACCTGGAGTAACAACCAGGGGACCATGTTTGAGAGTGTCACAAAGGCCAGCTGTAGGATTATTGAATCATGCTGGGAAAAGGAGCGAGCCCCTGTAGACACATACATAATGGGATTAGCGACAAGCATACGTGAACGGAATGATTATGAAGAGCAGGAAAACCAAGAGAAACCTGCAGTACCTTTTGTACAGCTTAATGTTATACGCCTGTTCGCCGAGCTGAGTGTTGCAGTCAACAAATCTGAGCTGGTAGATGTGATATTACCTCTTTTTATTGAAAGTCTAGAAGAGGGTGATGCTTCAACGCCTAGTTTGTTGAGACTCCGACTTCTTGACGCTGTGTCTCGAATGGCCAGTTTAGGTTTTGACAAATCTTACCGTGAAACAGTGGTTTTGATGACTAGAAGTTACTTGAACAAACTTTCAAATGTAGGATCAGCTGAAAGCAAAACAGAGGCTGCTGAAGCCACGACTGAGCGAGTTGAGACTCTACCTGCAGGATTTCTTGTTATTGCTAGTGGTCTTACTGGTGATAGATTGCGCTCAGATTTTCGTCATCGACTGCTCTCCTTATGCTCAGATGTTGGTTTAGCTGCAGAGGCTAAAAGTGGAAGGAGTGGAGCAGATTTCCTGGGTCCACTGCTGCCTGCAGTTGCTGCGATTTGTTCTGACTTTGATCCTACTTTAAATGCGGAGCCATCACTTTTAAAACTATTTCGCAACCTATGGTTCTATATTGCTCTTTTTGGCCTAGCACCACCAATACAGAAGACTCCAGTGACTACAAAGTCAGTTTCTACCACACTGAACAGTGTTGGAAGCACCGGTGCAATTTCCCTTCAGGCTGTAAATGGACCATATATGTGGAATGTGGAGTGGTCTTCTGCTGTTCAACGAATTTCTCAGGGGACTCCTCCACTTGTTGTTAGCTCAGTGAAATGGCTTGAGGACGAGTTAGAATTAAATGCTTTGCACAACCCAGGTAGCCGTCAAGGCAGTGGCAATGAGAAAGCTGCTCTTTCCCAACGAGCTGCTCTTTCTGCAGCTTTAGGAGGGAGAGTTGATGTCACAGCAATGACCACAATCTCAGGAGTGAAGGCGACTTACCTTCTTGCCGTAGCTTTTCTTGAGATCATCCGCTTCATCAGCAATGGTGGAATCCTAAATGGTGGCACCACTATTGATGCTGCAAGAAGTGCCTTTACTTGTGTGTTTGAATATCTCAAGACTCCCAATTTAATGCCAGCTGTCTTTCAGTGTTTAACAGCAATTGTCCACAGGGCTTTTGAAACAGCTGTGTTGTGGCTGGAAGAACGATTGTCTGAAATAGGGCATGATGCTGAGACCCGGGATTCAGTACTTACAATGCATACCTGTTTTCTAGTAAAGAGTCTGTCCCAGAGGGAGGATCATATACGAGATATTGCAGAGAACTTGTTGACTCAACTAAGAGACAAGTTTCCACAGGTTTTATGGTATTCTTCCTGCATAGACTCTATGCTATTTTCATTTAGTGACGACTCTTCTACTACCATCATCAATGATCCTGCTTGGACAGCCACAGTCCGTACCTTGTATCAGAGAATTGTTCGAGATTGGATAATTAAATCACTTTCAAGTGCTCCATGCACTAGCCAGGGCCTTCTTCAGGATAAACTTTGTAAAGCAAATACTTGGCAAAGAGCACAGCCCACAATTGATGTTGTTTTACTTTTATCTGAGATAAAAATTGGCACTGGGAAAAATGAATGGCCAATACAAACAGCAAATATTCCTGCGGTAATGGCTGCGGCAGCTGCCGCTTCCGGGGCAAATTTAAAAGTATCCGAGTCTTTTAACTTAGATGTTATCAGTTCTGGTAAGTGTAACCAAGCTGCAGCGACAGTTAAGTGCAACCACGCTGGAGAAATTGCAGGAATGAGAAGGTTGTATAACAGCATTGGTGGATTTCAGTCCAGTACTGCACCTCCTGGTGGTCTTGGACTTGGAGCTGGACTTCAGAGAATTATATCGGGAGCTTTTCCTCAGCACCCACAAGCTGAGGATGATTCTTTTAATGGAATGTTGCTTAATAAGTTTGTGCGTTTACTCCAGCAGTTTGTCAACGTAGCAGAGAAAGGTGGGGAAGTGGTCAGATCTGAATTTCGTGATACTTGCTCTCAAGCTACTGTGCTGCTCTTGTCACATTTGAGTTCTGGATCCAAATCAAACATGGAAGGCTTCTCGCAACTTCTTCGTCTTCTTTGCTGGTGTCCTGCTTACATTTCTACCCATGATGCAATGGAAACTGGTGTTTTCATATGGACATGGTTGGTTTCTGCTGCACCGGAGCTTGGAGCTCTCGTTCTTGCTGAACTTGTTGATGCATGGTTATGGACACTTGACACCAAGCGGGGTCTTTTTGCCTCTGAAGCAAGGTTTTCTGGACCTGCTGCAAAACTCAGGCCTCACCTGTCACCTGGGGAACCTGAACCGCAGCCTGACATCAATCCTGTTGAGCAAATAATTGCTCATCGACTATGGCTTGGATTTCTTATTGATCGTTTTGAGGTAGTTCGACACCAAAGCGTGGAGCAACTCCTGCTCCTTGGTAGGTTGCTGCAGGGGACAACGAAGCTTCCCTGGAATTTTTCACACCATCCTGCGGCCACTGGCACTTTTTTCACTCTGATGCTTCTAGGGCTCAAGTACTGCTCTTGCCAGTTTCAGGGAAATTTGCAAAAATTTCATCTGGGGCTTCAGTTGTTGGAAGATCGGATTTATAGGGCCGCTTTGGGTTGGTTTGCTTTCGAGCTTGAATGGTATGATACAAACTATGCAAACTTTGCTCAGTGTGAAGCCCAGTCTGTTTCTTTATTTGTTCAATACCTCACGAATATGAAAGGAGATACCATTCAAGTTGGGTCAAAAGGAAATGGACAAGACAATGGGAACTCTTTGACTGACACGAGTGATCTCTATCATCCTGTCTGGGGTCAAATGGAGAACTATGCTTTAGGAAGAGAAAAGCGGAGGCAGCTACTTTTAATGCTATGCCAGTATGAGGCTGATAGGCTTGACGTCTGGGCACAGCCAACTAACACAAAGGAAAGTAGTTCCCGACCCAAGATTAGTGCAGATAAATGGGTAGAATATACTAGGACTGCCTTCTCTGTGGATCCTAGGATTGCTTTATCTTTGGCCTCAAGGTTCCCTTCCAATACATTTATAAAAACTGAAGTTACTCAGCTTGTACAGGAAAATATAGTGGATGTCCGCAACATACCAGAAGCATTACCTTTCTTTATCACCCCAAAGGCAGTTGATGATAATTCAGTGCTCTTGCAACAATTGCCTCATTGGGCTCCTTGTTCTATTACACAAGCTCTAGAGTTCCTTACTCCAGCATACAAGGGACATCCACGGGTTATGGCATATGTTCTAAGGGTTTTGGAATCCTATCCTCCTGAACGAGTAACTTTTTTCATGCCACAGCTGGTGCAGTCCTTGCGACATGATGATGGGAAATTAGTTGAAGGTTATTTGCTTAGAGCTGCTCAAAGAAGTGACATATTTGCCCATATTCTTATCTGGCATTTGCAGGGTGAGACTGTACCTGAGACAGGAAAAGACCCAAACAGTGGGAAGAATGGTTCATTTCTAGAACTGCTGCCAGCTGTAAGGCAGCGCATAATTGACGGTTTTACGGGAAAGGCACTTGACATATTTAAAAGAGAGTTTGATTTCTTTGACAAAGTTACATCCATCTCTGGTGTACTATTTCCACTCCCTAAAGAAGAACGCCGAGCTGGTATCCGAAGGGAGTTGGAGAAAATTGAACTGGATGGCGAGGACCTTTATCTCCCAACAGCTCCTAACAAACTTGTTACGGGTATTCGAGTGGATAGTGGTATTCCCTTACAATCAGCTGCAAAAGTCCCAATCATGATTACTTTTAATGTAGTAGATCGAGATGGGGACAGAAGTGATGAAAAGCCACAAGCTTGCATTTTCAAGGTCGGAGATGACTGTAGACAAGATGTTCTCGCCCTTCAAGTAATATCACTACTTAGTGATATATTTGAAGCTGTTGGAATTAATCTTTATTTATATCCTTATGGTGTTCTGCCAACTGGTCCTGAGAGAGGTATAATAGAGGTTGTGCCAAATACACGTAGTAGAAGTCAGATGGGGGAAACGACTGATGGAGGTTTGTTTGAGATATTTCAACAAGACTTTGGACCTGTAGGATCTGCCAGTTTTGAGGCTGCACGCCAGAACTTCATCATTAGCAGTGCTGGTTATGCTGTTGCTAGTCTTTTGCTTCAACCAAAGGATAGACACAATGGCAACCTTCTCTTTGATAATGTTGGAAGGCTAGTTCACATTGACTTCGGTTTCATCCTTGAAACTTCTCCGGGTGGGAATATGCGTTTCGAAAGTGCTCATTTTAAGCTGAGCCATGAGATGACACAATTACTAGATCCATCTGGTGTTATGAAGAGTGATACATGGAGCCAATTTTTAAGTTTGTGTGTGAAGGGGTACCTTGCTGCCCGTCTACGTATGGATGGGATCATCACCACTGTAGCTTTAATGCTAGACAGCGGGTTGCCTTGCTTCAGCAGGGGTGATCCTATTGGCAATCTTCGGAAGAGATTTCATCCGGAGATGAGTGAGCGTGAAGCAGCCAATTTCATGACCCATGTTTGTAAAGATGCTTACAATAAGTGGACCACTGCTGGCTATGACTTGATACAATATCTGCAGCAAGGCATCGAGAAGTGA 6105 0.4534 MEALIELCDLIAKNPSQFSDKLSWICGKCPPPEYLTAGSPRVSRSQLNAVLAVSRFLSKCPDSADLRPKSVVVEFLRSVPNSFTQSFWPHPFNADSVTSFFVDFTGYVSKAAKASLDFAEELTAFAGEVIISAIGEPRSSIARAFLAGVSQNYIPISSSDANRLVTCLIDQFSAHTISVACTPRELLIAENSSSQSSPISVNHQPLTNYNDSPGNENTSGSSSSVASKAAEDGSTASSRGVVNGPHHVYRSSADLLALNLGLNDGNLGPISSSQQVISFEEESVEFLERQEIAFNLIAHVLENVHIESGLLEQVRLIGKKQIQSLSVFLKIRKRDWHEQGSLLKARINTKLSVYKAAVNLKIKSLSALDSDSRSVKRLVYEAVAILIDAAEACLLSGWRKLRSCEELFDSLLLGVGQIAIARGGQPLRILLIRLKPIVLNVCAQPDTWSNNQGTMFESVTKASCRIIESCWEKERAPVDTYIMGLATSIRERNDYEEQENQEKPAVPFVQLNVIRLFAELSVAVNKSELVDVILPLFIESLEEGDASTPSLLRLRLLDAVSRMASLGFDKSYRETVVLMTRSYLNKLSNVGSAESKTEAAEATTERVETLPAGFLVIASGLTGDRLRSDFRHRLLSLCSDVGLAAEAKSGRSGADFLGPLLPAVAAICSDFDPTLNAEPSLLKLFRNLWFYIALFGLAPPIQKTPVTTKSVSTTLNSVGSTGAISLQAVNGPYMWNVEWSSAVQRISQGTPPLVVSSVKWLEDELELNALHNPGSRQGSGNEKAALSQRAALSAALGGRVDVTAMTTISGVKATYLLAVAFLEIIRFISNGGILNGGTTIDAARSAFTCVFEYLKTPNLMPAVFQCLTAIVHRAFETAVLWLEERLSEIGHDAETRDSVLTMHTCFLVKSLSQREDHIRDIAENLLTQLRDKFPQVLWYSSCIDSMLFSFSDDSSTTIINDPAWTATVRTLYQRIVRDWIIKSLSSAPCTSQGLLQDKLCKANTWQRAQPTIDVVLLLSEIKIGTGKNEWPIQTANIPAVMAAAAAASGANLKVSESFNLDVISSGKCNQAAATVKCNHAGEIAGMRRLYNSIGGFQSSTAPPGGLGLGAGLQRIISGAFPQHPQAEDDSFNGMLLNKFVRLLQQFVNVAEKGGEVVRSEFRDTCSQATVLLLSHLSSGSKSNMEGFSQLLRLLCWCPAYISTHDAMETGVFIWTWLVSAAPELGALVLAELVDAWLWTLDTKRGLFASEARFSGPAAKLRPHLSPGEPEPQPDINPVEQIIAHRLWLGFLIDRFEVVRHQSVEQLLLLGRLLQGTTKLPWNFSHHPAATGTFFTLMLLGLKYCSCQFQGNLQKFHLGLQLLEDRIYRAALGWFAFELEWYDTNYANFAQCEAQSVSLFVQYLTNMKGDTIQVGSKGNGQDNGNSLTDTSDLYHPVWGQMENYALGREKRRQLLLMLCQYEADRLDVWAQPTNTKESSSRPKISADKWVEYTRTAFSVDPRIALSLASRFPSNTFIKTEVTQLVQENIVDVRNIPEALPFFITPKAVDDNSVLLQQLPHWAPCSITQALEFLTPAYKGHPRVMAYVLRVLESYPPERVTFFMPQLVQSLRHDDGKLVEGYLLRAAQRSDIFAHILIWHLQGETVPETGKDPNSGKNGSFLELLPAVRQRIIDGFTGKALDIFKREFDFFDKVTSISGVLFPLPKEERRAGIRRELEKIELDGEDLYLPTAPNKLVTGIRVDSGIPLQSAAKVPIMITFNVVDRDGDRSDEKPQACIFKVGDDCRQDVLALQVISLLSDIFEAVGINLYLYPYGVLPTGPERGIIEVVPNTRSRSQMGETTDGGLFEIFQQDFGPVGSASFEAARQNFIISSAGYAVASLLLQPKDRHNGNLLFDNVGRLVHIDFGFILETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSDTWSQFLSLCVKGYLAARLRMDGIITTVALMLDSGLPCFSRGDPIGNLRKRFHPEMSEREAANFMTHVCKDAYNKWTTAGYDLIQYLQQGIEK* 2035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1755 2034 SUPERFAMILY Protein kinase-like (PK-like) 1679 2027 IPR011009 -
Vra5g1755 2034 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1740 2018 IPR000403 -
Vra5g1755 2034 MobiDBLite consensus disorder prediction 193 241 - -
Vra5g1755 2034 Pfam PI4-kinase N-terminal region 294 1476 IPR045495 -
Vra5g1755 2034 SMART pi3k_hr2_4 1491 1684 IPR001263 -
Vra5g1755 2034 SUPERFAMILY ARM repeat 358 938 IPR016024 -
Vra5g1755 2034 MobiDBLite consensus disorder prediction 193 243 - -
Vra5g1755 2034 Pfam Phosphatidylinositol 3- and 4-kinase 1774 1833 IPR000403 -
Vra5g1755 2034 Pfam Phosphatidylinositol 3- and 4-kinase 1834 1981 IPR000403 -
Vra5g1755 2034 Gene3D - 1677 1825 - -
Vra5g1755 2034 Gene3D - 1826 2022 IPR036940 GO:0016301
Vra5g1755 2034 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 1531 1643 IPR001263 -
Vra5g1755 2034 SUPERFAMILY ARM repeat 1481 1643 IPR016024 -
Vra5g1755 2034 PANTHER BNAA06G03180D PROTEIN 1 2033 - -
Vra5g1755 2034 CDD PI4Kc_III_alpha 1734 2033 - -
Vra5g1755 2034 PANTHER PHOSPHATIDYLINOSITOL KINASE 1 2033 IPR015433 GO:0046854|GO:0048015
Vra5g1755 2034 Gene3D - 1475 1653 IPR042236 -
Vra5g1755 2034 ProSiteProfiles PIK helical domain profile. 1489 1666 IPR001263 -
Vra5g1755 2034 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1777 1791 IPR018936 GO:0016301
Vra5g1755 2034 SMART pi3k_hr1_6 1774 2031 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1755 Vra-Chr5 23687087 23706632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1755 1 2034 Acyl Lipid Metabolism Gene Families AT1G49340 72.882 0.0 3004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1755 K00888 - gmx:100796422 3614.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1755 5 23687087 23706632 Vra5g1755 5 23687087 23706632 ECH