Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1749 ATGGCTTCCATTTCCTGGTTCTGTTGTGTGCACGTGCGACCCACACTCTGCAACTTCACACCCTCTCAGGCAGATAAAGGTCCATCGCTTCTCGCATCCTTGGAACATCATCAAACCAAGTCATGTTCACTTTCTTCCATCGAAGAAGGACGTGGGGTTAATAGAAGGCAACTTCTTCTTCACACCGCAGTAGCAGTACCTGCATTTGCAGTCCCCAATGCATTGGCACTCAATGATGTGTCTGAGGATGTTCGTGTGTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCCAAGGGTGGCAAGTGGGAAATGGAGAGTCTAATGGATTTAAATCAATAACTGCCTTTTACCCAACAGAAACAGCCAATTCCAATGTGAGCGTTGCCATCACTGGGCTGGGACCGGATTTCACTAGGATGGAATCCTTTGGCAAAGTTGATGAGTTTGCACAGACTCTGGTTAGTGGACTAGACAGAAGCTGGCAAAGACCCCCGGGTGTGGCTGCTAAACTAATAGATTGTAGATCATCTAATGGGATTTATTACATCGAGTATTGGCTGCAAAATCCTGGTGAGAGTCGCAGATATTTATATTCAGCTATTGGGATGGCATCAAATGGTTGGTATAACAGATTGTATACGGTGACAGGACAGTTTGTGGAAGAAGAAACAGACAAATATGCTTCAGAAGTTCAGAAGGTAGTGGCATCTTTTAGGTTCATATGA 732 0.4481 MASISWFCCVHVRPTLCNFTPSQADKGPSLLASLEHHQTKSCSLSSIEEGRGVNRRQLLLHTAVAVPAFAVPNALALNDVSEDVRVYTDDENKFKIEIPQGWQVGNGESNGFKSITAFYPTETANSNVSVAITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWQRPPGVAAKLIDCRSSNGIYYIEYWLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASEVQKVVASFRFI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1749 243 Pfam PsbP 83 242 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vra5g1749 243 PANTHER - 36 243 - -
Vra5g1749 243 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 36 243 - -
Vra5g1749 243 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 76 242 - -
Vra5g1749 243 SUPERFAMILY Mog1p/PsbP-like 85 242 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1749 - - gmx:100785276 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1749 5 23645208 23647438 Vra5g1749 5 23645208 23647438 ECH