Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1744 ATGAAGGGTGCTGTTCTCGTCGCTATTGCCGCTTCCATCGGTAATTTTCTCCAGGGATGGGATAATGCAACCATCGCCGGGGCTATTGTTTATATTAAGAAAGACCTTGCGCTGCAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCTTTGATTGGAGCGACGGTAATCACCACATGCTCTGGTCCTATATCGGATTGGCTTGGTCGGCGACCCATGTTGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTTTGGTCCCCAAATGTGTATGTGTTGTGCTTGGCGAGGTTACTTGATGGATTTGGGATTGGCCTTGCTGTGACTCTTGTTCCGGTCTATATATCTGAAACGGCACCCTCTGAAATAAGGGGATCTTTGAATACGCTTCCTCAGTTCAGTGGTTCTGGAGGCATGTTTTTGTCATATTGTATGGTCTTTGGCATGTCGTTGACTCCATCGCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCCTCTATTTTGCACTGACAATTTTTTTCTTGCCTGAGTCTCCTCGGTGGCTGGTCAGCAAAGGAAGGATGATGGAGGCCAAAAAGGTGCTCCAAAGATTGCGCGGAAGGGAGGACGTGTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAATACATAATTGGCCCTGCTGAAGAGGTGGCTGATGGTCGGGAGCTAGGAACAGATAAAGATAAAATTCGATTATATGGATCCCAAGCAGGTCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGTCCCTCATGGATCCTATGGTGACACTGTTCGGTAGCATTCATGAGAAGCTCCCTGAGGCGGGAACTGGAAGCATGCGAAGCACTTTGTTTCCAAATTTTGGAAGCATGTTTAGCACTGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAAGACTACATGTCAGATGCAGCTGGTGGGGACTCTGACGATAATTTGCAAAGTCCTTTAATCTCACGTCAAACAACGAGCCTTGAAAAAGACATGCCTCCTCCTCCTTCCCATGGCAGTATCCTGAGCAGCATGAGGCGTCACAGCAGTCTTATGCAAGGATCAGCTGAGCAAGTTGGTAGTACAGGCATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGACTGAAAAAGGTGAGGAGGGAAAAAAGCAAGGAGAGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCGTCGTGGATCCGTTGTTTCAGTTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTGGTTAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGTCCTGCTATGGTTCACCCATCTGAGACTGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCTGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAACGGGGTTCTATATTACACACCTCAAATCCTCGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATGTAGGCATTGGCTCAGAGTCTGCATCATTTCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCTTGTATAGGCTTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAATTGCTACTTACTACAATTCCCGTGCTGATTGTGTCACTGATTATTTTGGTCATTGGAAGCCTAGTAAATTTTGGCAATGTGGCCCATGCGGCAATCTCAACTATATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTACGGACCAATTCCAAACATTCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATATGTGCTCTAGTGTTCTGGATTGGAGACATCATTATCACATACTCGCTGCCTGTGATGCTCAGCTCTTTAGGGCTTGCTGGTGTCTTCGCCATTTATGCCGTCGTTTGTTTCATCTCCTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAGGCTGCTGCAGCCAAGAATGAGTAG 2211 0.4681 MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPISDWLGRRPMLIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTPSPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMMEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPAEEVADGRELGTDKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMSLMDPMVTLFGSIHEKLPEAGTGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAAGGDSDDNLQSPLISRQTTSLEKDMPPPPSHGSILSSMRRHSSLMQGSAEQVGSTGIGGGWQLAWKWTEKGEEGKKQGEFKRIYLHEEGVSASRRGSVVSVPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDVGIGSESASFLISAFTTFLMLPCIGLAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTICVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLAGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAAAAKNE* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1744 736 CDD MFS_GLUT_like 513 710 - -
Vra5g1744 736 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra5g1744 736 MobiDBLite consensus disorder prediction 332 367 - -
Vra5g1744 736 SUPERFAMILY MFS general substrate transporter 5 717 IPR036259 -
Vra5g1744 736 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 733 - -
Vra5g1744 736 MobiDBLite consensus disorder prediction 335 354 - -
Vra5g1744 736 Gene3D MFS general substrate transporter like domains 2 260 IPR036259 -
Vra5g1744 736 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 712 IPR020846 GO:0022857
Vra5g1744 736 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1744 736 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1744 736 PRINTS Sugar transporter signature 525 535 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1744 736 PRINTS Sugar transporter signature 624 645 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1744 736 PRINTS Sugar transporter signature 647 659 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1744 736 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra5g1744 736 Gene3D MFS general substrate transporter like domains 495 733 IPR036259 -
Vra5g1744 736 CDD MFS_GLUT_like 10 191 - -
Vra5g1744 736 PANTHER - 1 733 - -
Vra5g1744 736 Pfam Sugar (and other) transporter 500 723 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra5g1744 736 Pfam Sugar (and other) transporter 7 218 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1744 Vra-Chr5 23605684 23610602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1744 1 736 Organic Solute Cotransporters AT4G35300 70.872 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1744 - - gmx:100791976 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1744 5 23605684 23610602 Vra5g1744 5 23605684 23610602 ECH