Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1740 ATGAAAAGAGGCATAATGAGGTCGAATCTGTTTCCGCTTCTCTTTGCATTTGCCTTTCTGTTTTCGCCTGTGTTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGTATTGATCTGACATCACAAATTGTGCGCATCACTACTTCGCTAAAGGTGGAGAACACGGGATCTGATGTTGTGTCTGAGATTTTGCTGTCCTTTCCTGAAAACCAGGCAAAACACTTGGCATACTTGAAAGCAATACTTGGCGAAGGGAAGGGAAAAGCAAAAACATCTTCTGGTGTTGGTTTACCCGTTAAAGTTGTCCAACCTAATGATGTACCTCCTGCCTTGACAATTTACTCCGTATCTTTACCAAAGGGTCTTGGGAAGGGACATAGTTTGACATTAGATGTCTTGGCTGTTTTTACCCACATATTGCAACCATTTCCAGAGAAAATCAACCAGGGTGACATCCAACTTCTACTGTTTCAAGAGAGTGCACAATATCTCTCTCCGTATGCTGTCAAGGCACAATCACTCACTCTTAAGTTGCCTGATGCAAGAATAGAGTCCTATTCAAAACTAGAAAATGCTAAACTTCAGGGATCTGAATTAAAATACGGTCCATATGAGAATATTCCCCCTTTCTCATATTTACCAATAGTTATTCACTATGAGAATAACCTACCCTTTGCTGTTGCTAAAGAGTTAGTGCGAGAGATCGAAGTTTCCCATTGGGGCAATGTACAGATCACAGAACATTACGAAATTATACATGCTGGTGCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCCATATTTAAGGGGTGCATCAGCTTTCAGGCGTCTTGTTGCCAAGCTGCCACCAAGAGCTCATTCTGTGTATTACAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTGTGGGGTGATTCAAGAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACTATTGGATATGGCTTGCCACTTCAGGACTTCTTATTTGGATTGGATGGAAAACGCTTCCTTAATATCTCTTTTGGTGCCCCTATCTACGAGTTGGTGATTGACACTATTTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAGGACATTTCAGTATCTGTTCCATTTCCCGTGAAAGAATGGCAGGAGACGAAGATTTCTCACTTGGATATTGTTGGTAGACCTGTTGTTGTTCTGGAGAAGAACAATGTTGTGCCTGAGCATAATGAGCATTTCCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCACGGAGCCTTTCATGTTGATCTCTGGGTTTTTCTTTCTGTTTGTTGCTTGCATTGTCTACTCACGCGCAGATATATCAATCTCCAAATCTTCCGCATCTTATTTGGCAAAGCTCCAGTGGGACGAGGTGCAAGCAACTACTCAGCTGATCCACGGTATCATTAGCCGTTGCTTAACAGCACATGACAAGCTAGAAACGTCATTGCATGATCTTTCTAGGACGGGAGACGTTCAAGCCTGTAAAGCAACACGGAAATCAGTAGATAGCTCATTGAAAGATCTCTCTAAAGAGTTGAAGCAACCATTGTCATTTTTGCAATCTTGTCCACAAGCTGCTCAAATATTACCAAAGGTGGAGGAACTTGTCACCAAGGAGAGAGAGTTGCAGGAGAAACTTGTATTGAAACACACTACCGTTGTAGACGGCTATGAGAAGAAGTTAGGTGGAAGGGAAATTGAGAATCGGATTGCTTCGTATCAGCAGAAAATTACTGCTTTGAGACGGGAGGTTGATGATCTTTTGGACTTGATTGATGAGATATGA 1857 0.4238 MKRGIMRSNLFPLLFAFAFLFSPVFSASDLILAKVDRRIDLTSQIVRITTSLKVENTGSDVVSEILLSFPENQAKHLAYLKAILGEGKGKAKTSSGVGLPVKVVQPNDVPPALTIYSVSLPKGLGKGHSLTLDVLAVFTHILQPFPEKINQGDIQLLLFQESAQYLSPYAVKAQSLTLKLPDARIESYSKLENAKLQGSELKYGPYENIPPFSYLPIVIHYENNLPFAVAKELVREIEVSHWGNVQITEHYEIIHAGAQSKGEFSRLDYQTRPYLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSRKTELEIEPRYPMFGGWKTAFTIGYGLPLQDFLFGLDGKRFLNISFGAPIYELVIDTIFVKVVLPEGSKDISVSVPFPVKEWQETKISHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLTEPFMLISGFFFLFVACIVYSRADISISKSSASYLAKLQWDEVQATTQLIHGIISRCLTAHDKLETSLHDLSRTGDVQACKATRKSVDSSLKDLSKELKQPLSFLQSCPQAAQILPKVEELVTKERELQEKLVLKHTTVVDGYEKKLGGREIENRIASYQQKITALRREVDDLLDLIDEI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1740 618 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 13 596 - -
Vra5g1740 618 Coils Coil 587 618 - -
Vra5g1740 618 Pfam Ribophorin I 33 458 IPR007676 GO:0006486|GO:0016021
Vra5g1740 618 PANTHER RIBOPHORIN I 13 596 IPR007676 GO:0006486|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1740 Vra-Chr5 23583134 23587380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1740 22 556 Miscellaneous Gene Families AT1G76400 67.103 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1740 K12666 - gmx:100796192 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1740 5 23583134 23587380 Vra5g1740 5 23583134 23587380 ECH