Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1739 ATGAGTTCGTCTTGCGCTTGCGCTTGCGCTTCTAATTCAACAAATTGGAGCATTGATTATGGAGATGCAATGCTTTCAAATTCAAAGCGAATCAGGTCAACGAAAATTGCCATGCCACTGTCAGTTTCTGGTTCCAGAAGATCCACGGCGCTTCTCATTTCATCGTTGCCGTTCACCTTCCTTTTGCTCTCTCCGCCGGCGGAGGCCAGACGCAACAAGAAGACGATTCCCCAAGAGGAATACCTCACAACTCCTGATGGATTGAAATACTATGATTTGGTTGAGGGCAAAGGTCCAGTAGCTGAAAAAGGAACAACCGTTCAGGTGCACTTTGATTGCTTATATCGCGGGATCACAGCTGTATCCAGTCGCGAATCTAAACTCCTAGCGGGAAATCGTATCATTGCTCAGCCGTACGAATTTAGGGTGGGAGCTCCTCCGGGAAAGGAAAGAAAACGTGAATTTGTTGATAATCCAAATGGTTTATTCTCCGCTCAAGCAGCACCCAAACCTCCACCTGCTATGTATACAATAGTGGAGGGAATGCGAGTTGGTGGAAAGCGAACTGTCATTGTTCCTCCTGAAAATGGGTATGGACAAAAGGGAATGAACGAGATTCCGCCTGGAGCTACATTTGAACTAAATGTTGAGCTTCTGCAAGTTTTAGCTACGTGA 675 0.4622 MSSSCACACASNSTNWSIDYGDAMLSNSKRIRSTKIAMPLSVSGSRRSTALLISSLPFTFLLLSPPAEARRNKKTIPQEEYLTTPDGLKYYDLVEGKGPVAEKGTTVQVHFDCLYRGITAVSSRESKLLAGNRIIAQPYEFRVGAPPGKERKREFVDNPNGLFSAQAAPKPPPAMYTIVEGMRVGGKRTVIVPPENGYGQKGMNEIPPGATFELNVELLQVLAT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1739 224 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 99 219 IPR001179 GO:0003755
Vra5g1739 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 28 222 IPR044180 -
Vra5g1739 224 Gene3D - 66 223 IPR046357 GO:0003755
Vra5g1739 224 SUPERFAMILY FKBP-like 73 221 - -
Vra5g1739 224 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 222 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1739 Vra-Chr5 23580008 23581606 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1739 K01802 - gmx:100527183 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1739 5 23580008 23581606 Vra5g1739 5 23580008 23581606 ECH