Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1737 ATGGCTAGGCGTCATGGATGGGAGCTTCCTTTTCACACGTTCCAGGTCGTGGCTATAACGGTATTTTTCTTACTATCTATTGCGTTTTATGCCTTCTTTGCCCCTTTTCTTGGAAAGGACATCTATGAATACGTGGCTATTGGTGTTTACTCTTTACTGGCTCTCTCTGTGTTCTTTCTTTATGTTCGATGCACTGCCATTGATCCTGCTGATCAGGGTGTAACGGTTGACTGTGACAAGTCGTCGAAGAATAGATCAAAACACGATGAAGAGTTGGCAGAACCCAGCAAGTTAGGACTAAAGGGTGAAGGAATGTCTGATCGGCATAATTCAAATTGGTGCTCGAAAGTTGGGTGTTTCTTTTGTGGTTTTCTTGTTAGAGAAGACTGCCGCAGTAATGAAGATAGCATTCCACAGCAGCAATCTGGAGAAGAGGATGCTTTGTTCTGCACTTTGTGCAATGCTGAGGTGCGGAAGTTCAGTAAGCATTGTCGAAGTTGTGACAAATGTGTTGATGGATTTGATCATCATTGTCGGTGGTTGAACAATTGTGTTGGAAAGAAGAATTACATCACGTTTGTGTGTCTTATGGCAGTGAGCCTTGTTTGGCTTATTGTTGAATGTGGAGTTGGGATTGCCGTGCTTGTCAGATGCTTTGTTGATAAGAAAGGTACAGAGCACCAGATAGCTGAAAAACTTGGAGCTGGATTCTCCAGGGTCCCATTTGCTACTGTAGTGGCCATATGCACGGCAGTTTCATTCCTTGCAACTGTGCCTTTGGGAGAATTATTCTTTTTCCATATGATCCTGATACGGAAGGGTATCACAACTTACGAGTATGTTGTTGCCATGAGAACTCTAAGTGAACCACCTGGTCCTTCAGTTGATGGAGGTGAACAACAGAGTCTACCATCATCTCCTACTAGTTCAGCTGTCACTGCAATGAGTGGAAGAAGCTCCGTTGGAATGAGTTTGCAGTACAAAGGGGCCTGGTGTACACCTCCAAGGATCTTTATGGATCATCCGGATGAAATTATACCACATTTGGAGCCTGGACGACTACCATCCACTGTTGATCCAGATGCAGTACAACAGCTACCTGACAAAGGGAAAAAGTTGAACCAGCGCCCTGTTCGGATAAGTGCATGGAAACTTGCGAAACTGGATTCTAATGAGGCAACAAAGGCGGCTGCTAAAGCTAGAGCATCATCGTCTGTGCTACGTCCAATTAGTTCTCGACCTCATGCATATGACGTCGATCATTTATCGAGCAGCAATGTGAGTGGAAGAAGCAGCCCAATTAGCAATCAAGGATTTCAGAACAAATATGACACTGCGGGGACATCAAGGTTATCTCCTTCCAAGAGCTCATACGCTCCTAGCCAAGCGAGCAAGGATGATATAGATGCATCATGTCATCACAGTATGAGCAACTTCAGCAGTCCACTAGTCTCAAACCTTACTCCTTCACCAATGCAGAAGCCTAGTTTGAACAGAGACCATTTCAACCCCATGTATCAACAACCATCGGGAAACCAGTCTCCTTCATCAGCCAAAGAAAGTGAGGGGAACACGAATCCAGTTCAAGAAAATGTGGCACGCCTTCCAATGAGAAGCAACAGCTTAGCTGTTTCAGATAATAGAAGATCGTCGGTGTTCTGGGACCAAGCTGCCGGACGCTTTGTGTCATCTTCATCTTCATCAAGAGGTCCTGGCAGTTCCCAGATATCTGGAACAGAGTTATTGTACACTGGTCGATCTATATTTTTTGGCAGTCCCGTTGTGAATGAACAGCCAAATACAGGAACAAGAGTAAGCAGTTCAGTAGCTGGTATTCCTGATAGAGATTCTACTTTAAGGGATTTTCAGCAGGGTAGATCACATAGAGGTGGCCAGCTTCCTGTGTTTGTTCCTGGTTATTCCCAGCAAAATAAGTTCCCCTAG 1944 0.4475 MARRHGWELPFHTFQVVAITVFFLLSIAFYAFFAPFLGKDIYEYVAIGVYSLLALSVFFLYVRCTAIDPADQGVTVDCDKSSKNRSKHDEELAEPSKLGLKGEGMSDRHNSNWCSKVGCFFCGFLVREDCRSNEDSIPQQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGKKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDKKGTEHQIAEKLGAGFSRVPFATVVAICTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQQSLPSSPTSSAVTAMSGRSSVGMSLQYKGAWCTPPRIFMDHPDEIIPHLEPGRLPSTVDPDAVQQLPDKGKKLNQRPVRISAWKLAKLDSNEATKAAAKARASSSVLRPISSRPHAYDVDHLSSSNVSGRSSPISNQGFQNKYDTAGTSRLSPSKSSYAPSQASKDDIDASCHHSMSNFSSPLVSNLTPSPMQKPSLNRDHFNPMYQQPSGNQSPSSAKESEGNTNPVQENVARLPMRSNSLAVSDNRRSSVFWDQAAGRFVSSSSSSRGPGSSQISGTELLYTGRSIFFGSPVVNEQPNTGTRVSSSVAGIPDRDSTLRDFQQGRSHRGGQLPVFVPGYSQQNKFP* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1737 647 MobiDBLite consensus disorder prediction 80 106 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 349 375 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 80 104 - -
Vra5g1737 647 PANTHER PROTEIN S-ACYLTRANSFERASE 21 9 488 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 416 547 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 291 315 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 418 464 - -
Vra5g1737 647 Pfam DHHC palmitoyltransferase 146 282 IPR001594 GO:0016409
Vra5g1737 647 ProSiteProfiles DHHC domain profile. 148 198 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 594 613 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 594 647 - -
Vra5g1737 647 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 488 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 298 315 - -
Vra5g1737 647 MobiDBLite consensus disorder prediction 473 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1737 Vra-Chr5 23569709 23575497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1737 128 279 Lipid Metabolism Gene Families AT4G22750 27.097 1.68e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1737 K20027 - gmx:100818808 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1737 5 23569709 23575497 Vra5g1737 5 23569709 23575497 ECH