Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1725 ATGAACAACACAATGGTGGAAGAGAAGGAAGATGTGATCAATGGAAGGGAAGTTATACCCCTTCTCACCCCATTCAAGATGGGAAAATTCAACCTTTCTCACAGGATTGTTCTGGCACCATTAACAAGAACAAGATCTTACAACTTCGTGGCTCAGCCTCATGCTGCTCTCTATTATTCTCAAAGAACAACAAAGGGTGGACTTTTGATTGGAGAAGCCTCAGGAGTGTCAGAAACTGCACAAGGGTACCCAAATACACCAGGCATTTGGACAAGAGAACAAGTGGAAGCATGGAAACCAATTGTGAGAGCTGTTCACGAGAAAGGGGGAATATTCTTTTGCCAACTTTGGCATGCTGGAAGAGTCTCCAACTATGTGTATCAGCCAAATGGACAACCTCCAATTTCAAGCACAAACAAGGCAATTGAAGGAAGCAACACCAAATACCCCTCTCCACGTCGTCTCAGAACAGATGAAATACCTATGATTGTCAATGACTTCAGAATGGCAGCCAAAAATGCTATAGAAGCTGGCTTTGATGGTGTGGAGATACATGGAGCCAATGGATACTTACTTGACCAGTTCCTAAAAGACCATGTGAACGACAGAGACGATGAATTTGGAGGTAGTTTAGAAAACCGTTGTCGATTTCCACTGATGGTCGTGGAGGCAATAATTAAGGAGGTTGGATCAGACAAAGTTGGTGTTAGACTCTCTCCTTTTGCTAACTACTGTGATTGCAAAGACTCTGATCCTCAAGCACTTGGCATTTACATGGCTCAATCCTTAAGAAAATTGAACATTCTTTATTGTCATGTCATTGAACCTAGGATGGTTACAATGTTTGAGAAGTGTGATACCAATGTGTCATTGTCGGATATTAGAAAGGCTTTTGGTGGAACTTTTATTGTGGCTGGAGGTTACAATAGGAGTGGTGGAAACAAAGTAGTCGCTGACGGTGGTGCTGATTTGGTGGCTTATGGACGCTTGTTTTTGGCTAATCCAGATTTGCCTAAGAGATTTGAGCTTGATGCTGAATTGAACAAGCCTGATAGAAGCACTTTTTACAGCAGTGATCCTGTAGTTGGATATACAGATTATCCTTTTCTTCAACATGATCACTGA 1125 0.4204 MNNTMVEEKEDVINGREVIPLLTPFKMGKFNLSHRIVLAPLTRTRSYNFVAQPHAALYYSQRTTKGGLLIGEASGVSETAQGYPNTPGIWTREQVEAWKPIVRAVHEKGGIFFCQLWHAGRVSNYVYQPNGQPPISSTNKAIEGSNTKYPSPRRLRTDEIPMIVNDFRMAAKNAIEAGFDGVEIHGANGYLLDQFLKDHVNDRDDEFGGSLENRCRFPLMVVEAIIKEVGSDKVGVRLSPFANYCDCKDSDPQALGIYMAQSLRKLNILYCHVIEPRMVTMFEKCDTNVSLSDIRKAFGGTFIVAGGYNRSGGNKVVADGGADLVAYGRLFLANPDLPKRFELDAELNKPDRSTFYSSDPVVGYTDYPFLQHDH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1725 374 CDD OYE_like_FMN 20 352 - -
Vra5g1725 374 Pfam NADH:flavin oxidoreductase / NADH oxidase family 21 345 IPR001155 GO:0010181|GO:0016491
Vra5g1725 374 PANTHER NADH OXIDOREDUCTASE-RELATED 17 373 IPR045247 GO:0010181|GO:0016491
Vra5g1725 374 SUPERFAMILY FMN-linked oxidoreductases 20 371 - -
Vra5g1725 374 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 17 373 - -
Vra5g1725 374 Gene3D Aldolase class I 9 373 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1725 Vra-Chr5 23496307 23498281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1725 15 371 Acyl Lipid Metabolism Gene Families AT1G76690 65.934 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1725 K05894 - gmx:100790284 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1725 5 23496307 23498281 Vra5g1725 5 23496307 23498281 ECH