Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1720 ATGCGGCGGAGACCCCGCACCACCTTCATTGTCTCCATACTCTCCATTATCACCTTCGCTTCGTTCTCTCTTTATTTCTCTCGCAATGCCATTTCCACTTGGCAACCTTACTCCGACATCCCAAAAGCAAATTTAAAAGCCTTCAAAAATGCATTCCTTCTTAACACCACCGCCAACAGCAACAACAAGAATGTCGTCGAGAGTAACAACGTTAGCCAACTCACCCGCCAAACACGTCGTGTATCCTCTGTCAAGGACTCCTTATCCACCGTCTCCGTTCTCATCCCCGATTGGGAGATTCTCGTCATCGTTGTCGTAAGCACGCCTTTCTCCTCCTCCCACCAATATCATTGCCTCTTCCCCAACAAGGCCAGGTCTTTGGCCAGATTCTCCGGCGTCTTACCTTACACCAATCGCCCCACCTTCAAGTGCGACATGCCGGAATCCGTCCGGCGACATCGCATGTTCTCCCAGCCGACGCTTGTGACGGGAACATCAGAGACGGAGTTGCTGAAACCAATGCCTCAACTCATGAAGTGGAACTTTCTCGTGTTCGAGTCTTTCTCCACGGAAAATGATGTTGTTGTTTTCGCCAAAGGGGTTAACCATCGCAATGGATACGACAGGTCTCCGGGGGAACTCCGCTGCGTTTTTGACTTTGGAAATGGAGTTCGTACCGCCGTCACGAGCTCCGTCCAAGAAGTGTTTCGTTGCCCCCACCCAGACTTTGAGCCGATTTTAGATTCTTATTATGGGTTGCCCCAGAGAATCGGAATCTCCCTTGAGATCGTTGCGGAAAATACCGTTGTCCCTTCGGTGGCGTATTACATTCCTAGCTCTAAGCCCAAGCTCGACGCCTGCACAAGGAGACTCGGTGAGGCACAACCCAAATATGTCTTATGTGCCTGCACCATGGTTCACAACGTGGCAAAATTCTTACGAGAATGGGTTATGTATCATTCGAAAGTTGGTGTGGATAATTTCATCTTATACGACAATGGAAGCGATGATGATTTGTACAGTTTGATCAGGGAGCTCCGACAAGAAGGGTACAACATTAGCACTGTGTTTTGGATCTGGCCAAAGACTCAAGAAGCCGGGTTTTCCCACAGTGTCGTGTACTCCAAATCAAAGGCACTGTGTAAATGGATTATGTACGTGGATGTTGACGAGTTCGTGTTTTCTCCCTCTTGGGGACATGAAAGCAACCCTTCGTTAAAATCATTGCTACCACACAAACAGCCATTAGAAGAAGGAACAAGGAACAAGGTGGGACAAGTGTCGATGAAATGTTTGGAATTTGGGCCTTCGGGTCAACGAAGACACCCAGAGGAAGGTGTGACGCAGGGGTACACGTGTCGGATGAGGGCGGAGCAGAGGCACAAATCAATGGTGATGGTGGATGCGGTGGACCCCAGTTTGAGGAACGTGATACACCATTTTTATGTGAACGAAAAGGAAGGGTTCGTGTCGAAGCAGGTTAGCTTGGAAGAGGGTTTGGTGAATCACTACAAGTATCAAGCATGGGATGAGTTCAAGAACAAGTTCCGAAGGAGGGTTTCTGCTTATGTTGTCGATTGGAAACAAGAGTTGAACCCAACCTCAAAGGATAGAACTCCTGGGTTGGGATTCAAACCCATAGAACCCGAAGATTGGACACAAAGATTCTGTGAAGTTACAGACCTGAGGTTGAAGTTCTTGACCCGAAAATGGTTCCGGTTGCTCACGCCCAACGGCTACAGAATGGCATGGCAAAACCGATGA 1764 0.4864 MRRRPRTTFIVSILSIITFASFSLYFSRNAISTWQPYSDIPKANLKAFKNAFLLNTTANSNNKNVVESNNVSQLTRQTRRVSSVKDSLSTVSVLIPDWEILVIVVVSTPFSSSHQYHCLFPNKARSLARFSGVLPYTNRPTFKCDMPESVRRHRMFSQPTLVTGTSETELLKPMPQLMKWNFLVFESFSTENDVVVFAKGVNHRNGYDRSPGELRCVFDFGNGVRTAVTSSVQEVFRCPHPDFEPILDSYYGLPQRIGISLEIVAENTVVPSVAYYIPSSKPKLDACTRRLGEAQPKYVLCACTMVHNVAKFLREWVMYHSKVGVDNFILYDNGSDDDLYSLIRELRQEGYNISTVFWIWPKTQEAGFSHSVVYSKSKALCKWIMYVDVDEFVFSPSWGHESNPSLKSLLPHKQPLEEGTRNKVGQVSMKCLEFGPSGQRRHPEEGVTQGYTCRMRAEQRHKSMVMVDAVDPSLRNVIHHFYVNEKEGFVSKQVSLEEGLVNHYKYQAWDEFKNKFRRRVSAYVVDWKQELNPTSKDRTPGLGFKPIEPEDWTQRFCEVTDLRLKFLTRKWFRLLTPNGYRMAWQNR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1720 587 PANTHER UNCHARACTERIZED 6 585 - -
Vra5g1720 587 Pfam Glycosyltransferase family 92 297 526 IPR008166 -
Vra5g1720 587 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 6 585 - -
Vra5g1720 587 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 398 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1720 Vra-Chr5 23471802 23474381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1720 - - pvu:PHAVU_009G011700g 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1720 5 23471802 23474381 Vra5g1720 5 23471802 23474381 ECH