Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1712 ATGGCTCTTTCAGTTTTTCTTCTGCTCTCAATTAGCATCTGCTACCTCGTTTTTTCCCAAGATCTTCTTCTCTCTGTGAACGCCTCTAACGCTCAATCTCACAATCTCACTCAAAATTCAGTCACGCCAATCAACTACGATCTCTACCGTTCCAGTCGCAATTTGATGGGGGAGATCAGGGCTTTGGTCCGCCGTCACCCGGATAAGCTCACTATGGAGACACTTAAAGCTGCAAACAAAGGCTATGGTGCTCAGATTACCGTGGTCACTTATGGCAAAGAAAAGGAAGAGAAAGATAAGAGGTCAAAGCTTCGGATTCTACTTAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATTTTGTCAATCTTAAGTGAAGAAAAACTTCTACCGAGCACGGACCAAGCTTCCTTAAACAGTGTACTTGACAAGCTTGTCATAAAGGTGGTTCCAATGGAAAACCCCAATGGCCGCAAAGTCGTTGAAGCTGGAGATCTCTGTGAGAGAAGAAATGGAAGGGGAGTGGATCTCAATCGAAATTGGAGTGTAGATTGGGGCAAAAAGGAGAAGGATTATGACCCATATGAGGAGAATCCTGGAGTTGCTCCATTCAGCGAGCCTGAAAGTCAAATTATGCGGAAACTTGCTATATCTTTTGAACCACATCTATGGGTAAATGTGCACTCCGGAATGGAGGCTCTTTTTATGCCATACGATCATAAAAACACAACACTAGATGGATTGGCATTGAAACGGATGAAATCGTTTCTTGAAGAAGTAAACCATCATCATTGCCAAGAGCGCTGCATGATTGGGTCTGGAGGCGGTTCAGTCGGGTATTTTGCACACGGGACAGCAACTGATTTCATGTATGACGTTGTAGGGGTACCCATGGCTTTCACCTTTGAGATATATGGAGATGGAACAGCTTCATCTAAAGACTGTTTCAAAATGTTCAATCCCACCGACCCTGCTGCCTACAATAGAGTTCTCAATGACTGGTCTGCGACATTCTTCACAATTTTCAAATTGGTGCCGCTCCAGATTGGTGAAAAAGCGCCTATTTTGGAACTGGAAAAGTTAGTATCTATAGATGAATATCTAGACGGGTATTTGATGGAGAGAAGAAATAGATATGGAAAGAAGATGGAGGTGCTTGAGCTTGGAATGCAAGAAATAAGAACATATTTTAGGTTATTTTTATTATCTTCAGTGTTATTGTTGTTCATGTTCTGCTCTAGAATTTCAAAAAGCAAGTGTAGTAGACCATTGGTTTCTTCTATGCCCCTCTAA 1311 0.4241 MALSVFLLLSISICYLVFSQDLLLSVNASNAQSHNLTQNSVTPINYDLYRSSRNLMGEIRALVRRHPDKLTMETLKAANKGYGAQITVVTYGKEKEEKDKRSKLRILLSFGQHGRELITTELALRILSILSEEKLLPSTDQASLNSVLDKLVIKVVPMENPNGRKVVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGVAPFSEPESQIMRKLAISFEPHLWVNVHSGMEALFMPYDHKNTTLDGLALKRMKSFLEEVNHHHCQERCMIGSGGGSVGYFAHGTATDFMYDVVGVPMAFTFEIYGDGTASSKDCFKMFNPTDPAAYNRVLNDWSATFFTIFKLVPLQIGEKAPILELEKLVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYFRLFLLSSVLLLFMFCSRISKSKCSRPLVSSMPL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1712 436 Gene3D Zn peptidases 44 331 - -
Vra5g1712 436 Pfam Zinc carboxypeptidase 59 329 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vra5g1712 436 SUPERFAMILY Zn-dependent exopeptidases 45 351 - -
Vra5g1712 436 SMART zn_carb 49 320 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vra5g1712 436 CDD M14-CPA-like 103 325 IPR034269 -
Vra5g1712 436 PANTHER OS02G0119300 PROTEIN 24 434 - -
Vra5g1712 436 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 24 434 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1712 - - gmx:100813842 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1712 5 23389598 23394657 Vra5g1712 5 23389598 23394657 ECH