Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1706 ATGCAAGCTGCATCTTCAGGCATTGGTTACGGTCTCAAATATCAGGCTAGATGCATATCGGATGTGAAAGCAGACACAGATCACACCAGTTTCCTTGCAGGAACTCTCAGCCTCAAAGAAGAAAACGAGGTACATCTGATTCGGCTCTCGTCCAGTGGAACCGAACTCTTCTGCGAGGGACTGTTTTCTCACCCCAACGAGATCTGGGACCTTGTCTCTTGTCCGTTTGATCAACGGATCTTTTCAACCGTCTACTCTAACGGTGAAACTTACGGAGCAGCGATATGGCAGATACCTGAGTTATATGGCGAATTAAATTCCCCTCAGCTCGAGAGAATTACTTCCCTTGACACTGATTCTGGGAAGATTAAATGTATTCTTTGGTGGCCATCTGGACGGAATGATAAACTGATCAGCATCAATGAGGAAAATATGTACCTGTGGAATTTAGATGTTTCAAAGAAAACTGCACAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAATTATCTGGAGGGGCATGGGATCCTCATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCATATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATTTCGGTGGAATGTTCTCATGTATGCAGTGTTGATTACCATCCTCAGAAGCAGCACATACTTGTTACTGCAGAACATGAGTCTGGGATACATATTTGGGATCTAAGAAAACCCAAAGTTCCCATCCAGGAGCTTCCAGGACATACTCATTGGACGTGGACTGTCAAGTGTAATCCAGAGTATGATGGAATGATCTTGAGTAGTGGTACGGATTCAACTGTCAATTTGTGGCTTGCCTCAACGAATCATGATGACCTAACAACAGAAAGACTAGTAGATTCATCTGCTCGATGGGTTGATCCATTGCTTAATTCATACAGTGATTATGAAGATAGCATTTATGGGCTCACATGGAGTTCCCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAGAATCAGTTAAGCCTTTCATACCCAAAAGATGA 1053 0.4311 MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRNDKLISINEENMYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESYLQFWDVRTMKKTISVECSHVCSVDYHPQKQHILVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSSGTDSTVNLWLASTNHDDLTTERLVDSSARWVDPLLNSYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKPFIPKR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1706 350 SMART WD40_4 55 97 IPR001680 GO:0005515
Vra5g1706 350 SMART WD40_4 241 281 IPR001680 GO:0005515
Vra5g1706 350 SMART WD40_4 302 342 IPR001680 GO:0005515
Vra5g1706 350 SMART WD40_4 109 149 IPR001680 GO:0005515
Vra5g1706 350 SMART WD40_4 197 237 IPR001680 GO:0005515
Vra5g1706 350 PANTHER WD-REPEAT PROTEIN 1 350 IPR040323 -
Vra5g1706 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 280 IPR001680 GO:0005515
Vra5g1706 350 Gene3D - 14 347 IPR015943 GO:0005515
Vra5g1706 350 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 1 350 - -
Vra5g1706 350 SUPERFAMILY WD40 repeat-like 18 340 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1706 K23289 - gmx:100779030 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1706 5 23342319 23348019 Vra5g1706 5 23342319 23348019 ECH