Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1703 ATGGGCTGCAACACCTCGAGGCTTGACCGGCTACCGGCAGTGGCGCTGTGCCGTGACCGTTGCAAGTTCTTGGACGAAGCGCTCCGCCAAAGCTACGCACTCGCCGACGCTCACGTGGCGCACATGGAGTCACTCAGAACACTTGGACCCGCTCTCCTCTGTTTCTTCGACGGTTTCGACGATTCCGACGAAACGAATGTCCCAAACAAGGAAACAAAGACTTCTGTCGCGAAATCTGAACCACCGCCTCGTTCGCCTTCTTCCCTTAGTTCAGACTCAGATGATACGCATGTTCACGTTCTTTTGCATTCTGAATCGGAAACCGAAGAAGCGGAGAAAGAAGAGTTCCAATCGTTCGCGCAGGCTCGTTATGATTACTCTCCATTTTCTCCTCCTCGTTCAGGCGGATACTTCGGGTCGAAGCCGCCGTCGCCGCCGCCGCCGCCTAGCGGCTCGGCATGGGACTTCCTTAACTTCTTTGAGCCGTACGAGAAGTACCACGTGCCGTACATTCCCAGCGGCGGTGACGCTGACGCCGCCGAGAAGGAAGAAGGGAAAGTTGTGAAACGTGACGTGAATAAATTGAAGGCAGAAAATGGAGAAGCGAGGAAGAATAAGAAGAATGGTGATTTGAAGGAAAAGAAGGTGGTTTTGGAGAAAGAGGAAGTGGTTTTAGTTTCAGAGCAGTGTAGTGACTCTATGAAAGTGAAATCAGGGAAAGGTTTTTCCGAGGCTGTGAAAGAGATTCAGATTCTGTTTGAGAGAGCGTCGGAGTCAGGGAACCCAATTTTGGAATTGTTGGACGTTGGGAAACTTCGTTATCATCGAAAATTTGATCTCAATCCGGTTTCATGCAAGATGATGCATGTGTTTACTCCTTCAAGTCCTCTCGGAGCTAAATGCATGGAATCTCCATTGCTTGTACGGAGAATGGGATCTGAGAGTGAAGAAGTTTGTAGTTACGGAAATCTCTCTTCTACTCTGAAGAAACTATGTATGTGGGAGAGGAAGCTGTATCATGAAGTCAAGGCCGAGGAGAAATTGCGCATGCTTCATCAGAAGAAGTGTAAGCAGTTGAGACGAATGAAACAAAAGGATGCCGATGCACAGAAAATTGATTCTGTTCAAACTTTCATTGGGATTTTAGCTACAAAAATGAAAATTTCTATCCAAGTAGTTGACAAGATATCAATTACAATTAGTAAGTTGAGGGAAGAGGAGTTGTGGCCGCAGATCAACCGGTTTATTCTCACGTTTCTAGGAATGTGGAGAGACATGCAAGAATGTTATAAATGTCAATATCAAAAAATTGTTGAAGGCAAAACTTTAGATGCCTCTTCCTTAAGCAGAAAGCATGGCAGTGATCATATTGATGCAACAATGAAGCTCAAATCTGAGATACAGAAATGGAACTTGAGCTTCTTAGATTGGATTCAAGCACAGAAGTCTCATGTGAAAGCGTTGAATGGTTGGCTCGTAAGATGTCTATTATATGAACCTGAAGAAGTACCCGATGACTCAACTCCCTTTTCACCCAGTAAGATTGGGGCACCGCCTGTGTTTGTCATCTGCAACAAATGGTCGAGAGCAGTAGATAATCTCTCAGAGAAGAATGTAATTGAAGCCGTGAATGGGTTTATGCTCAGATTGAATGAGCTCTTGGAAAAGCATATTTTGGAGCTCCAACAAAAACTAACATTGGACAAAGAATTAGAGAAAAAAGTGAAAATGTTGGACAGGGAGGAGCAAAAGATGCACAAAGTGGTGCGTGCTAGAGAGAAACAAATGGTTCCCGTTGGTAGAGAAGATTTTGAAGCACTGTTACGAGGGGATGCTGTGCATCATGCTGATATTGTTGATACCACTAACCTACAATTAGGTTTGAAGCAGATCTTTGGTGCCATGGAGAGGTTCACTGACACCACTGCTCGCTTGTATGAAGAACTTTGCCAACAAATTAAGCAAGAGGACCATGTTTTGGGAGAATCCAACAAAAATAACTAG 2004 0.4491 MGCNTSRLDRLPAVALCRDRCKFLDEALRQSYALADAHVAHMESLRTLGPALLCFFDGFDDSDETNVPNKETKTSVAKSEPPPRSPSSLSSDSDDTHVHVLLHSESETEEAEKEEFQSFAQARYDYSPFSPPRSGGYFGSKPPSPPPPPSGSAWDFLNFFEPYEKYHVPYIPSGGDADAAEKEEGKVVKRDVNKLKAENGEARKNKKNGDLKEKKVVLEKEEVVLVSEQCSDSMKVKSGKGFSEAVKEIQILFERASESGNPILELLDVGKLRYHRKFDLNPVSCKMMHVFTPSSPLGAKCMESPLLVRRMGSESEEVCSYGNLSSTLKKLCMWERKLYHEVKAEEKLRMLHQKKCKQLRRMKQKDADAQKIDSVQTFIGILATKMKISIQVVDKISITISKLREEELWPQINRFILTFLGMWRDMQECYKCQYQKIVEGKTLDASSLSRKHGSDHIDATMKLKSEIQKWNLSFLDWIQAQKSHVKALNGWLVRCLLYEPEEVPDDSTPFSPSKIGAPPVFVICNKWSRAVDNLSEKNVIEAVNGFMLRLNELLEKHILELQQKLTLDKELEKKVKMLDREEQKMHKVVRAREKQMVPVGREDFEALLRGDAVHHADIVDTTNLQLGLKQIFGAMERFTDTTARLYEELCQQIKQEDHVLGESNKNN* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1703 667 PANTHER UNCHARACTERIZED 1 660 - -
Vra5g1703 667 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Vra5g1703 667 Pfam Protein of unknown function (DUF632) 243 550 IPR006867 -
Vra5g1703 667 MobiDBLite consensus disorder prediction 131 153 - -
Vra5g1703 667 MobiDBLite consensus disorder prediction 65 96 - -
Vra5g1703 667 MobiDBLite consensus disorder prediction 69 95 - -
Vra5g1703 667 PANTHER F5M15.15 1 660 - -
Vra5g1703 667 MobiDBLite consensus disorder prediction 138 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1703 Vra-Chr5 23314778 23318066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1703 1 81 Acyl Lipid Metabolism Gene Families AT2G27090 40.476 2.75e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1703 - - gmx:100815394 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1703 5 23314778 23318066 Vra5g1703 5 23314778 23318066 ECH