Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1700 ATGGAGGAAGTGGTGGAAATAAAGGTAAGCATCTCAACTCCAGCAGTTGAAGTTTCATCACGCGATGGGGTCCCCAAAACTCCCAAAAGCCCTTTTACATCTCGTTTCATGAGCACCCCTTTGGCCAGTCCCATGAAGAAAGCCATTGAAAACGTGCAAGGTTACTTCGGAGAAGTTGGTCGCTTCACCAAGCTCGATCCACAAGATGATTGGCTTCCCATCACCCAATCCAGAGACGGAAACGCATATTACGCTGCGTTTCATGTCCTTTCTTCAGGGATCGGATTTCAGGCCCTTCTTCTTCTCTTCGCCTTCACCACTCTTGGCTGGACTTGGGGAATCACGTCTCTCTGTGTGGCTTTTACATGGCAACTATACACGCTGTGGCTACTGGTTCAGCTTCACGAATCAGAATCAGGGGTGCGCCATAGTAGGTACCTCCGACTTGCTATGGCAGCATTCGGAGTAAAGATGGGAAAAGTAATGGCACTGTTCCCAATAATGTACTTATCTGGTGGGACGTGTGTAACGCTGATAATGATCGGTGCAAGCACAATGAAGATATTCTTTCAGATGGTGTTTGGAGAGCCATGCCCCCTCTCACCAATTGAGTGGTATTTGGTGTTTACATGCACAGCTATTTTGCTTGCACAGTTACCAAACCTCAATTCAATTGCAGGGGTTTCCCTCATTGGAGCCGTCACTGCCATAGGTTACTGTGCTCTTATATTTATATTATCTGTGGTCAAAGGTAGACTTGCTCATGTATCGTATGAGCCACCAAGGGGACAATCAGACACTACCATGGTTTTTAGGGCGTGGAATGCACTTGGGATCATTGCCTTTGCTTTCCGTGGTCACAATCTTGTGTTGGAAATACAGGGAACCATGCCTTCCGACGCTAAGCAACCTTCACGCTTGGCTATGTGGAGAGGTGTTATGTTTGCTTACTTGGTGATCGCTTTGTGTTTGTTCCCTCTTGCCATTGGAGGTTATTGGGCCTATGGAAATTTAATACCTACTAATGGAGGGATGTTAGGTGCTTTACACAAATACCACGAACATGATACGTCAAAATTCCTCATCGCTTTGACAAGCTTGTTGGTTGTTATAAACTGCCTCACTTCCTTCCAAATCTATGCAATGCCGGTATTTGACAATCTGGAGTTTAAATACACCAGCAAGAAGAACAGGCCTTGCCCACGATGGCTGAGGATAGCATTCAGGGGGCTCTTTGGGTGCCTAGCATTTTTTATTGCTGTAACTTTACCATTCTTACCTAGTTTGGCAGGTCTGATTGGAGGGGTTGCTCTGCCAATAACCTTAGCTTATCCCTGTTTGATGTGGATACAGATTAAGAAACCACAGAAACGTAGCACAAACTGGTACCTGAACTGGACACTAGGAATTATTGGGATGATTCTGAGCCTACTGGTTGTCATAGGAGCCATTTGGGGCATAGTAGAACAGGGCATAGAGATCCATTTCTTCAGTCCACAGTAG 1503 0.4584 MEEVVEIKVSISTPAVEVSSRDGVPKTPKSPFTSRFMSTPLASPMKKAIENVQGYFGEVGRFTKLDPQDDWLPITQSRDGNAYYAAFHVLSSGIGFQALLLLFAFTTLGWTWGITSLCVAFTWQLYTLWLLVQLHESESGVRHSRYLRLAMAAFGVKMGKVMALFPIMYLSGGTCVTLIMIGASTMKIFFQMVFGEPCPLSPIEWYLVFTCTAILLAQLPNLNSIAGVSLIGAVTAIGYCALIFILSVVKGRLAHVSYEPPRGQSDTTMVFRAWNALGIIAFAFRGHNLVLEIQGTMPSDAKQPSRLAMWRGVMFAYLVIALCLFPLAIGGYWAYGNLIPTNGGMLGALHKYHEHDTSKFLIALTSLLVVINCLTSFQIYAMPVFDNLEFKYTSKKNRPCPRWLRIAFRGLFGCLAFFIAVTLPFLPSLAGLIGGVALPITLAYPCLMWIQIKKPQKRSTNWYLNWTLGIIGMILSLLVVIGAIWGIVEQGIEIHFFSPQ* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1700 500 Pfam Transmembrane amino acid transporter protein 80 488 IPR013057 -
Vra5g1700 500 PANTHER OS05G0424000 PROTEIN-RELATED 54 495 - -
Vra5g1700 500 PANTHER OSJNBA0084K11.20 PROTEIN 54 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1700 Vra-Chr5 23291337 23295651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1700 3 499 Organic Solute Cotransporters AT1G47670 55.664 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1700 - - gmx:100788860 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1700 5 23291337 23295651 Vra5g1700 5 23291337 23295651 ECH