Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1688 ATGGAGAAATTATATGGCCTGAGTCATCTCTTCATGACAGTGTTTCTTCACAATTTTGCCATATTCATGGTGGTGCCAGCCATCACTGATGTAACAATGGCTGCTCTATGTCCTGGACAAGATGAATGCTCGCTTGCCATCTACCTCACTGGTTTTCAACAAGCGATGATTGGAGTGGGTACGCTCGTGATGATGCCACTGTTAGGTAATCTCTCCGATAAGTATGGGAGGAAGGCCATTCTCACAGTTCCTATGATCCTCACGATCATTCCCACAGGCATATTAGCTTACAACAGGACCAAAAAATTCTTCTATGTGTACTATGTGTTCAAAATACTCATTTCGATGGTATGCGAAGGAAGCGTCCCTTGCCTCGCTCTAGCTTATGTGGCAGATAACATTCCAGAAAGTGGAAGAAGCACTGCATTTGGCATTATTTCAGGGATAGGATCTGCCGCGTTCGTGTGTGCCACTTTATCAGCTCGATTCTTATCCACTGCCCAAACTTTTCAGGTTTCTACTCTTATTGCTGTGATTGGAGCAGTGTACATGCAATTTTTTCTTCGAGATTCAGTCATTGATGACAGACACCTTTACACCCCAATCATTTCACAACAAAAGCCCACAGTTTCTAAGGTCGATGCAAAATTGGAAAGTAACAAGCATCTTCTTAAAGCATTGCGTTCTTTCAAGGACCTAACCTCCTTCCTCGGTAGCAGCTTCACTATTACACAAGCAGCAATTGTTGCATTCTTTAGTAACCTTGCTGATGTTGGCCTTCATGGATCAATGCTGTATTTCTTAAAGGCTCAATTTCATTTTGATAAGAATCAATTTGCTGACTTGATGGTCATTTCTGGAATTTCAGGGACTGTGTCACAGCTTCTTGTTATGCCGATTTTGGCTCCTATTCTGGGTGAGGCAAGGCTACTTTCAATAGGGCTATTCTTTCATTGTGTACACATGTTCCTTTACAGCATAGCATGGTCCTCCTTGGTTCCTTACGCTTCTGCCATGTTCTCAATTCTATTTGTTTTCTCACAACCTTGTATACGAAGTATTGTGTCTAAACAAGTTGGTCCCCATGAGCAGGGAAAGGCTCAAGGTTGCATCTCTGGCATATGTTCAGTTGCACATATAGTTTCTCCCTTAGTTTTCTCTCCATTAACAGCTCTCTTCCTTTCTGAAAAGGCACCTTTCGATTTTCCCGGATTTAGTATAATGTGCATTGGCTTTGCTTCGATGGTATCTTTCGTTCAAAGTATGATGCTCCGAGTGGTTCCTCCCATTTTGAATTAG 1299 0.4226 MEKLYGLSHLFMTVFLHNFAIFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPLLGNLSDKYGRKAILTVPMILTIIPTGILAYNRTKKFFYVYYVFKILISMVCEGSVPCLALAYVADNIPESGRSTAFGIISGIGSAAFVCATLSARFLSTAQTFQVSTLIAVIGAVYMQFFLRDSVIDDRHLYTPIISQQKPTVSKVDAKLESNKHLLKALRSFKDLTSFLGSSFTITQAAIVAFFSNLADVGLHGSMLYFLKAQFHFDKNQFADLMVISGISGTVSQLLVMPILAPILGEARLLSIGLFFHCVHMFLYSIAWSSLVPYASAMFSILFVFSQPCIRSIVSKQVGPHEQGKAQGCISGICSVAHIVSPLVFSPLTALFLSEKAPFDFPGFSIMCIGFASMVSFVQSMMLRVVPPILN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1688 432 Gene3D MFS general substrate transporter like domains 7 423 IPR036259 -
Vra5g1688 432 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 6 427 - -
Vra5g1688 432 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 427 - -
Vra5g1688 432 CDD MFS_SLC46_TetA_like 10 423 - -
Vra5g1688 432 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 432 IPR020846 GO:0022857
Vra5g1688 432 SUPERFAMILY MFS general substrate transporter 10 417 IPR036259 -
Vra5g1688 432 Pfam Major Facilitator Superfamily 10 383 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1688 Vra-Chr5 23198750 23206105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1688 2 432 Organic Solute Cotransporters AT2G16990 45.695 8.37e-119 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1688 - - gmx:100789917 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1688 5 23198750 23206105 Vra5g1688 5 23198750 23206105 ECH