Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1682 ATGAGAGCGGTGATGAAGGATGAAACTCAAGCTGTGGTGAATGATAATTCTCACAACGGCAAATTCTCGCATCTGCTTGCTTCCCAAGATCGTGATTATCTTCTTTCTCCAACTGGGGCTCAGGTGAAGGTGAGTGATCTTGAAGGGAAAGTAGTGGGTCTATTATTCGGTGCGAATTGGTACCCACCATGCCGCGTATTCACCCAAGCCCTAGTTGCAATCTACGAGGAGTTGAAAAGCCGTTTCGCTCAGTTTGAGATTGTGTATGTGTCCTCTGACGAAGACTTGGATGCTTTCGGTAGCTTCTATGGAAACATGCCATGGTTAGCGATACCGTTCTCTGATTTGGAAACGAAGAAATGGTTGACCAGAAAGTATGAGGTGGAAGGCATTCCGTGCTTGATTTTGTTGCAACCAGAGGATGGTAAAGATGAGGGAACAGTTCGCGATGGGGTTGAACTTATTTACCGTTACGGAGCCGAAGCTTACCCGTTCTCTAACGAGAGGTTGGAGCAGCTGCGAAAGGAAGACAAAGTGAAGCGTGAAAACCAGACCCTCCTGAATTTGCTGTCAAACCAGCATAGAGACTATGTTCTGAGTCACACTCACTCTGGATTTAAACAGGTACCTGTCGCTTCTCTAGTGGGTAAAACAATTGCACTCTACTTCTCCGCCGAGTGGTGCGTGCCATGCGCGAAGTTCACTCCGAAACTGATTTCCGTTTACGAGAAGATTAAGCAGGAGCTAGCAGAGAAGGGAGAGGAAGACTTCGAAGTTGTGCTGGTATCCAGCGACCGTGACAGAGCATCCTTCGAGTCATACTACAGCAGCATGCCTTGGTTAGCCTTGCCTTTCGGTGATTCCGAGACGAAGAACCTCGTTCGACACTTCAACGTGCAAGGGATTCCATGGTTGGTGATCGTAGGTCCTGATGGTAAAACAATAACAGTGCATGGTAGGAGCTTGATAAACTTGTACCAAGAGAACGCGTACCCTTTCACGAACGCCAAAGTGGAAGAGCTGGAAAAGAAGCTTGAGGAAGAGGCGAAGGATCTTCCGGCACTGGTTTATCACGAAGGTCATCGGCATGACCTGAATTTGGTGTCTGATGGGAACGGTGGAGGTCCCTTTATCTGCTGTGTGTGCGATGAACAAGGGTCTAGTTGGGCCTACCAGTGTCTCCAATGTGGTTATGAAGTGCACCCCAAATGCGTCAGAACAGTCGACCGTCATAACAGTGTGTTAATAACTAATTAA 1257 0.4781 MRAVMKDETQAVVNDNSHNGKFSHLLASQDRDYLLSPTGAQVKVSDLEGKVVGLLFGANWYPPCRVFTQALVAIYEELKSRFAQFEIVYVSSDEDLDAFGSFYGNMPWLAIPFSDLETKKWLTRKYEVEGIPCLILLQPEDGKDEGTVRDGVELIYRYGAEAYPFSNERLEQLRKEDKVKRENQTLLNLLSNQHRDYVLSHTHSGFKQVPVASLVGKTIALYFSAEWCVPCAKFTPKLISVYEKIKQELAEKGEEDFEVVLVSSDRDRASFESYYSSMPWLALPFGDSETKNLVRHFNVQGIPWLVIVGPDGKTITVHGRSLINLYQENAYPFTNAKVEELEKKLEEEAKDLPALVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVDRHNSVLITN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1682 418 SUPERFAMILY Thioredoxin-like 197 318 IPR036249 -
Vra5g1682 418 Coils Coil 331 351 - -
Vra5g1682 418 Pfam Thioredoxin-like 216 313 IPR012336 -
Vra5g1682 418 Pfam Thioredoxin-like 49 142 IPR012336 -
Vra5g1682 418 Gene3D Glutaredoxin 194 335 - -
Vra5g1682 418 Gene3D Glutaredoxin 25 167 - -
Vra5g1682 418 Pfam C1 domain 360 405 IPR004146 -
Vra5g1682 418 ProSiteProfiles Thioredoxin domain profile. 24 175 IPR013766 -
Vra5g1682 418 SMART c1_12 361 410 IPR002219 -
Vra5g1682 418 PANTHER THIOREDOXIN 13 404 - -
Vra5g1682 418 ProSiteProfiles Thioredoxin domain profile. 188 350 IPR013766 -
Vra5g1682 418 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 360 412 IPR002219 -
Vra5g1682 418 SUPERFAMILY Cysteine-rich domain 349 407 IPR046349 -
Vra5g1682 418 SUPERFAMILY Thioredoxin-like 34 139 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1682 Vra-Chr5 23153910 23158529 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1682 K17609 - gmx:100808125 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1682 5 23153910 23158529 Vra5g1682 5 23153910 23158529 ECH