Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1652 ATGAAGGGAAGCAAGAGGCCGATCCACGCCGTGACGACATGGTTTCGGCGGCAACCGCCCAAGATGAAGGTCTTTCTTGCGGTGCTAATCGGCCTGGCCGCCTTGCTCTTCCTCAGAATCGTTGTTCATGACCACGATAGCCTTTTCGTTGCCGCCGAGTTTGTCCATGCATTAGGAATCTCCGTCCTCATTTACAAACTTACCAAGGAAAGAACCTGTGCCGGGCTTTCGCTGAAATCGCAGGAGCTGACGGCAATATTTCTAGGCGTAAGACTTTACTGCAGTTTTGTGATGGAATATGATATACACACCTTACTCGATATGGCAACACTGGGAACGACCATCTGGGTTATCTATATGATACGCTTCAAACTCAAGTCTAGTTATATGGATGATAAGGATAACCTTGCAACGTACTATGTGGTGATACCTTGTGCTGTGCTGTCCTTGTTTATTCATCCAACAACCCGACATCATACAGTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTCCCTCAGCTGCGGGTCATGCAGAACGCTAAGATCGTTGAACCATTCACCGCACACTATGTTTTTGCCCTGGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTTCTCCAGGTAATAGATACTCGTGGACGTCTACTAACTGCGTTGGGTTACGGATTGTGGCCTTCATTTGTTCTTCTATCAGAAATTGTTCAAACTTTCATCCTGGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTCGGAGGACAACTTGTTGTTCGACTTCCTGCCGGAGTGGTGTAA 819 0.464 MKGSKRPIHAVTTWFRRQPPKMKVFLAVLIGLAALLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKERTCAGLSLKSQELTAIFLGVRLYCSFVMEYDIHTLLDMATLGTTIWVIYMIRFKLKSSYMDDKDNLATYYVVIPCAVLSLFIHPTTRHHTVNRILWAFCVYLEAVSVLPQLRVMQNAKIVEPFTAHYVFALGVARFLSCAHWVLQVIDTRGRLLTALGYGLWPSFVLLSEIVQTFILADFCYYYVKSLVGGQLVVRLPAGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1652 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1652 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1652 Vra-Chr5 22928026 22931006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1652 4 272 Miscellaneous Gene Families AT4G38790 79.182 4.61e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1652 - K10949 gmx:100787747 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1652 5 22928026 22931006 Vra5g1652 5 22928026 22931006 ECH