Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1624 ATGCGCCCACTTGCACATTCCTATTGCTTATGTTCTAATCTAACCTTCCTCTACAAAACCCTTGCATTTGCACCAGGAATTCCTATACGTCACAGAAATTCTTCTCTTGCGAAAGTGTTGGACAACGTTGGCATGGCAACCCAAGGTTCCCGATCCCAGATTGAACTTGTAGTAGACACGACCACGACCACGACCACCTCGACCGTTTCCAACAGTTTTAGCAACTATCAACACTCAACCTCTTTCACAACGCTCCTAATCTCTGTTCTGACCAAGTTGCATGCAGGCTACTTCAGAATAAGCCTCTCTCTCGGAAGCCAAGCATTGCTGTGGAAGACGATAATCACATCGGAACAAGACACAACCACTCTGCCGCACGTGCTTTCCACGCTTCCTTCAGCGGCTGTCTATGCACTCTGGTCTCTCTCCCTTTTCACTCTAGTGTTACTCTCCCTTCTCTACCTCCTGAGGTGCTTCTTTTTCTTTAAAATGGTGAAGGCCGAGTTCTTGCACCCTGTAGGGGTTAACTACCTCTTCGCTCCCTGGATTTCGTGGCTTCTCTTGCTTGAATCAGCGCCGTTCTTGGCGCCCAAAACCGCGTTGTACTTTGTTCTGTGGTGGGTGTTTGCGGTCCCGATGATGGTGCTTGACGTGAAGATCTACGGGCAGTGGTTGACGAAGGGGAAGAGGGTTTTATCTTCTGCAGCGGGGAACCCCACGAGCCAGTTGTCGGTGATAGGGAACTTGGTGGGGGCACAAGCTGCCGCGCACATGGGGTGGAAAGAGTGTGCGCTGTGGTTGTTTTCGGTGGGAATGGTGCATTACGTGGTGCTTTTAGTTACGCTATATCAGCGATTATCGGGTAGAGATGGGGTTCCAGTGTTGTTAAGGCCAGTTTTGTTCTTGTTCATTGCAGCACCTAGCGTAGCAAGCTTGGCTTGGGAATCCATTGTTGGAACCTTTGACACTGCTTCCAAGATGCTCTTTTTTCTTTCCCTCTTCCTATTCCTCTCACTGATTTGCAGGCCAAGGCTGTTCAGAAGATCAATGAAAAGGTTCAACGTTGCATGGTGGGCTTACTCATTTCCGATTACTGCACTTGCTCTTGTTTCAACGGATTATGCAGAAGAAGTGAAAGGAACTTTTTCTCACATCCTAATGCTCCTTCTGTTGGCTCTTTCAGTTCTTGTCTCCCTTGCTCTCACCATGTTTACTCTCCTCAACTCTAACATGCTTCTACCGGATACATATATATAA 1257 0.4813 MRPLAHSYCLCSNLTFLYKTLAFAPGIPIRHRNSSLAKVLDNVGMATQGSRSQIELVVDTTTTTTTSTVSNSFSNYQHSTSFTTLLISVLTKLHAGYFRISLSLGSQALLWKTIITSEQDTTTLPHVLSTLPSAAVYALWSLSLFTLVLLSLLYLLRCFFFFKMVKAEFLHPVGVNYLFAPWISWLLLLESAPFLAPKTALYFVLWWVFAVPMMVLDVKIYGQWLTKGKRVLSSAAGNPTSQLSVIGNLVGAQAAAHMGWKECALWLFSVGMVHYVVLLVTLYQRLSGRDGVPVLLRPVLFLFIAAPSVASLAWESIVGTFDTASKMLFFLSLFLFLSLICRPRLFRRSMKRFNVAWWAYSFPITALALVSTDYAEEVKGTFSHILMLLLLALSVLVSLALTMFTLLNSNMLLPDTYI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1624 418 PANTHER OS11G0274300 PROTEIN 43 415 - -
Vra5g1624 418 CDD TDT_SLAC1_like 93 387 - -
Vra5g1624 418 PANTHER - 43 415 IPR030183 GO:0006873|GO:0008308|GO:0016021
Vra5g1624 418 Pfam Voltage-dependent anion channel 93 406 IPR004695 GO:0016021|GO:0055085
Vra5g1624 418 Gene3D - 69 413 IPR038665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1624 Vra-Chr5 22668370 22671217 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1624 - - vra:106760480 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1624 5 22668370 22671217 Vra5g1624 5 22668370 22671217 ECH