Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1593 ATGGGAACCCTTGGGAGAGCGATCTACAGCGTTGGTTTCTGGATTCGCGAGACTGGACAGGCCATTGATCGTCTCGGTTCCCGCCTTCAGGGCGGTTACTTCTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGATAAGGCTCCTGTTGTTGATAAGGATGTATTTGTTGCTCCAAGTGCCTCCGTCATTGGAGACGTTCAAGTTGGTAGAGGATCATCCATTTGGTATGGATGTGTCTTGAGAGGTGATGTTAACAGCATCAGAGTTGGAAGTGGAACTAACATACAGGATAACTCTCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTCTTGCCTACAGTTATTGGGGACAATGTCACTGTGGGTCATAGTGCTGTTTTACACGGTTGTACTGTTGAGGACGAGGCTTTTGTTGGTATGGGTGCCGTATTACTTGATGGAGTAGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTGAGACAGAATACAAGGATACCTTCTGGCGAGGTATGGGCAGGCAATCCTGCAAAGTTCCTGAGAAAGCTAAGTAATGAAGAGATAACATTCATCTCCCAGTCAGCCATCAATTATACTAACCTTGCACAGGTCCATGCTGCTGAGAATTCGAAGTCGTATGATGAAATTGAGTTTGAGAAGGTGTTGCGAAAGAAGTATGCTCGTAAAGATGAGGAGTATGACTCTATGCTGGGTGTTGTTCGCGAGATCCCACCAGAGCTTATTCTTCCCGATAATGTCTTACCTGATAAAGCAGAAAAGGCTCTTCAAAAATGA 822 0.4538 MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGGYFFQEQLSRHRTLMNIFDKAPVVDKDVFVAPSASVIGDVQVGRGSSIWYGCVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLSGKVLPTVIGDNVTVGHSAVLHGCTVEDEAFVGMGAVLLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLSNEEITFISQSAINYTNLAQVHAAENSKSYDEIEFEKVLRKKYARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALQK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1593 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Vra5g1593 273 CDD LbH_gamma_CA_like 54 212 - -
Vra5g1593 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Vra5g1593 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Vra5g1593 273 Gene3D Hexapeptide repeat proteins 43 223 - -
Vra5g1593 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1593 Vra-Chr5 22418529 22422428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1593 121 196 Miscellaneous Gene Families AT2G17640 34.118 6.35e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1593 K01726 - gmx:100777972 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1593 5 22418529 22422428 Vra5g1593 5 22418529 22422428 ECH