Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1587 ATGAGATTCAGTGGAAGGACCTGTGATCCAAGGGATCCTAAAACCACACTGCTGGTTTTTGCGTGGCATGGATGTTGGTATGAAGCAGAACAACAAATGCTAGGATTGTGCGGGATACTGCGACTTCGCCAAAACCCTCTGAGGGGCGCAGCAATATTTCAACAATTCCAAGGAAATGCGATCTCTAACCTAAACAAAATAAGTTCAAATTTTGGATGTGTCACATCCTCTCCACGCAAACAGCAGAAAGGGTTGGAGAATGTAACAGTGTCAGAGGTACTAATGACAAAAGGTGAAGAAAACATCGGCTCCTGGCTTTGGTGTCGAACTGATGATGCTGTCATTAATGCAATGAAAAACATGGCTGATAATAACATTGGATCATTGGTGGTACTAAAGCCAGAAGGGAAGCACATAGCAGGGATTGTCACAGAAAGAGACTGCTTGAAAAAAATAGTTGCACAAGGAAGATCTCCCTTATACACACAAGTTGGTCAAATAATGACTGACGAGAACAACCTGATAACGGTGACCTCTGACACCAACATTCTTCAAGCAATGAAAATTATGACAGAGAATCGCATCCGGCATGTTCCAGTTATAGATGGGAAAATAGTTGGTATGATTTCCATTGTAGATGTGGTGCGAGCAGTGATGGAGCAGCAAAGTGGAGAACTGAAGCGACTCAATGACTACATCAGAGGAGAATACTATTAG 717 0.4268 MRFSGRTCDPRDPKTTLLVFAWHGCWYEAEQQMLGLCGILRLRQNPLRGAAIFQQFQGNAISNLNKISSNFGCVTSSPRKQQKGLENVTVSEVLMTKGEENIGSWLWCRTDDAVINAMKNMADNNIGSLVVLKPEGKHIAGIVTERDCLKKIVAQGRSPLYTQVGQIMTDENNLITVTSDTNILQAMKIMTENRIRHVPVIDGKIVGMISIVDVVRAVMEQQSGELKRLNDYIRGEYY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1587 238 CDD CBS_pair_bac_euk 108 216 IPR044725 -
Vra5g1587 238 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 33 237 - -
Vra5g1587 238 SMART cbs_1 104 153 IPR000644 -
Vra5g1587 238 SMART cbs_1 173 219 IPR000644 -
Vra5g1587 238 SUPERFAMILY CBS-domain pair 87 225 IPR046342 -
Vra5g1587 238 Gene3D - 83 237 IPR046342 -
Vra5g1587 238 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 33 237 - -
Vra5g1587 238 ProSiteProfiles CBS domain profile. 95 160 IPR000644 -
Vra5g1587 238 Pfam CBS domain 164 219 IPR000644 -
Vra5g1587 238 Pfam CBS domain 106 153 IPR000644 -
Vra5g1587 238 ProSiteProfiles CBS domain profile. 168 226 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1587 Vra-Chr5 22391370 22394301 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1587 - - vra:106761689 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1587 5 22391370 22394301 Vra5g1587 5 22391370 22394301 ECH