Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1583 ATGGGCGAACACACGCTAGGTCAAGCACAATCCCTAATCGAACCTCAACCCCACCCAGCTCCATCCTCCTCCGCCGCTGGCCCCGACGGCGCTCAAGCGGACTCAGAACTAAACAATGTCCTTCCGCACGTAAACTCCCCTGCCTCCAAAATCCCCCTCCGTCCCCGTAAGATCCGGAAGGTCTCACCGGACCCTTCCACATCCGAATCCCTAACCGAACCCTCTAAACCGGGCAAGAACGGCGGCCGGAGCACCAAGCACGTTCCGCCTTCGCGAGCCATGACGGTGGTGCCGCGCTTAGTGGCGCGTTCACTCTCGTATGAAGGTGAGGTGGAGATCGCGCTCCGATTTCTCAGGAACGCTGACCCTCTCCTCTCTCCTCTAATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTAACGCGTAGCATCTTGTACCAGCAACTCGCGTACAAAGCAGGCACCTCCATCTACACGCGCTTCATCGCGCTCTGCGGTGGCGAAAACGGCGTCGTTCCTGAAACCGTTCTCGCTTTGACTCCCCAACAGCTTCGCCAAATTGGGGTTTCGGGGCGGAAGGCGAGTTACCTTCACGATTTGGCGAGGAAGTACCAGAACGGGATACTATCGGATGCGGCCATTGTGAACATGGATGATAAGTCACTCTTCACTATGCTAACCATGGTCAATGGAATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTTTCCCTACACAGACCCGATGTTCTCCCAATCAATGATTTGGGTGTGAGGAAAGGGGTTCAGCTTCTTTATAACCTCGAGGACTTGCCGCGGCCGTCGCAGATGGACCAATTGTGCGAGAAGTGGAGGCCTTATCGTTCTGTTGCGTCGTGGTATATGTGGAGATTTGTTGAAGCCAAAGGAACTCCTTCTAGTGCCGTGGCAGTAGCCACTGGTGCCGGTTTGCAGCAGCAGCATCACCACCAGCACCAACAACATGAGCAACAGCAGCAACAGCAACATCCTCCACAGCCGCAGCTTCTGGACCCCATAAATAGTATGTTTAATCTCGGGGCCGCCTGTGCTTGGGGACAATGA 1104 0.5498 MGEHTLGQAQSLIEPQPHPAPSSSAAGPDGAQADSELNNVLPHVNSPASKIPLRPRKIRKVSPDPSTSESLTEPSKPGKNGGRSTKHVPPSRAMTVVPRLVARSLSYEGEVEIALRFLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDAAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQQQHHHQHQQHEQQQQQQHPPQPQLLDPINSMFNLGAACAWGQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1583 367 Gene3D Hypothetical protein; domain 2 141 254 - -
Vra5g1583 367 MobiDBLite consensus disorder prediction 64 79 - -
Vra5g1583 367 SUPERFAMILY DNA-glycosylase 133 305 IPR011257 GO:0003824|GO:0006281
Vra5g1583 367 PANTHER BNAC05G15000D PROTEIN 39 361 - -
Vra5g1583 367 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 39 361 - -
Vra5g1583 367 SMART endo3end 152 307 IPR003265 GO:0006284
Vra5g1583 367 Pfam HhH-GPD superfamily base excision DNA repair protein 149 292 IPR003265 GO:0006284
Vra5g1583 367 MobiDBLite consensus disorder prediction 337 351 - -
Vra5g1583 367 CDD ENDO3c 144 305 IPR003265 GO:0006284
Vra5g1583 367 MobiDBLite consensus disorder prediction 1 92 - -
Vra5g1583 367 Gene3D - 118 304 - -
Vra5g1583 367 MobiDBLite consensus disorder prediction 320 351 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1583 K01247 - gmx:100790760 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1583 5 22375744 22379634 Vra5g1583 5 22375744 22379634 ECH