Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1581 ATGCTGGTGGAACTGCATTTCCATTCCAATTTCGAACTTGTTCTTGCATTCGCGTTTGCGCCTCAAACGCTAACTCTGCAGTGCCCGCGGAATCTGATTCCCTCCCATTCGCTCTCTCCACCATGTCCACGCCTATTTAATCGCTGCACGATGCGAATTCCCGAGGGGCGCCTCACCTTTTCTCTCTCCAATTTCTCTCCTCGACTCGCACCTCTTTTGTCTACTCGCCTTCGCTTCTTTTCTGGAATCTGCGCCAAACGCCCTCACTCCGTCGCCAGCGCCACGTCACCAGGAGTTAATCCGTTGCATGCTCAATATTCAATGGACGGAAACCATGAAATTGGTGTACATGATTCAGGATTGGTGGGTTCGCCTGGCAGTGATGGCAGAAAACAGCCACGTGTATGGTCATCTCCTGAACATGGATTTAAAACTGAAATAAGCAAGCAGATATTCTGTAATCGATCACTGAATATGAAGAACATCGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAGTACAAGCCTGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTCGTTTATGATTTGGGATACCCTCGTGAGTTACTAAATTGGTGTTTTAACTGGAAGTACATGGTCAGAGGCTTGGTTCTTGACAAAAAGAGAGGAAACATATTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCACGGATTTAGAGAGTTGTCAAAAGAAGATAAAGTTGGAACCTATGGAAATACTTTAATACGTGATTCCTTTGATGAACCGGATTATGCTCTAATTGATACTCTCTTTTCACTTGCGGAGGCCTACTTGTTTGCTCAATTGGTTGATTTCAAGGATTGTAATCCTGGCAAGATTCAAGAGGGTGTTGACTATGCTCGCATGTACAAAGATGTTCGAGCTGCAGTTGATTTGTGTCATCGCGATGGAACATTGAAGCAAATGGTTGCTAAAGAACCAAAAAGGTATATTAATGAAGACTCCTCAATAGTGCCCATGCTTGAAATGCTCAGAGACTCTGGTCGTGCAACATTTTTAGTGACAAATAGTTTATGGGACTATACAAACATTGTCATGAATTTCCTCTGTGGATCCAGCATGGAAGATGTCAGTAACAATTTTTTCTGGCTTCAATACTTTGATGTCGTAATCACTGGGAGTGCAAAGCCGGGTTTTTTTCATGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACGGGAATGCTTCTCAATACAGATAATGGCTCTCCCATGCCCCAGGTGGGTAATACCTCAGCAAGGTTGTTCACAGAAGCAAAGAATCATGCCTGTCCAGTTTTCCAGGGAGGAAATGTTGCTCATCTTCATAAACTGCTTTCCATTGAATCTAGTTCTCAGGTTCTCTACGTTGGGGATCATATTTATGGAGATATATTACGCAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAGTCCCAGAACTTGAGAAGGAAGTTAAACTTCTCTGGGAATCTAGGGATACCCGCAAGGAACTTCAATTCTTGAGGAGTGAGCGTGACCGCATCGAGGATGAAATACATCATTTGAAGTGGTCTCTCAAATTCAAGAATCCAGATGCTGATTCCAAGCAGAAGTTATGTTCAGAACTTGATACGTTGGAGCTTGAAAGAGAGAGAGTGAGATTAAGGCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCACGAGCCATGGGGTCAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCGTGCCTGTATACTAGCCAAGTATCTAACCTGGGCTTGTACTCTCCAGACAAGTATTACAGACCTAGTGAAGATTTCATGCAGCATGAATTTGGCATTGTGGCTTATGAGTCACCAGACACTTAA 1944 0.4306 MLVELHFHSNFELVLAFAFAPQTLTLQCPRNLIPSHSLSPPCPRLFNRCTMRIPEGRLTFSLSNFSPRLAPLLSTRLRFFSGICAKRPHSVASATSPGVNPLHAQYSMDGNHEIGVHDSGLVGSPGSDGRKQPRVWSSPEHGFKTEISKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPRELLNWCFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLIRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIQEGVDYARMYKDVRAAVDLCHRDGTLKQMVAKEPKRYINEDSSIVPMLEMLRDSGRATFLVTNSLWDYTNIVMNFLCGSSMEDVSNNFFWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNTSARLFTEAKNHACPVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWESRDTRKELQFLRSERDRIEDEIHHLKWSLKFKNPDADSKQKLCSELDTLELERERVRLRHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLYSPDKYYRPSEDFMQHEFGIVAYESPDT* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1581 647 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 151 519 IPR008380 -
Vra5g1581 647 Coils Coil 512 532 - -
Vra5g1581 647 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 92 640 IPR008380 -
Vra5g1581 647 Gene3D - 147 195 IPR023214 -
Vra5g1581 647 Gene3D - 311 528 IPR023214 -
Vra5g1581 647 Pfam 5' nucleotidase family 151 637 IPR008380 -
Vra5g1581 647 Coils Coil 550 577 - -
Vra5g1581 647 MobiDBLite consensus disorder prediction 117 139 - -
Vra5g1581 647 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 92 640 - -
Vra5g1581 647 CDD HAD_cN-II 152 612 - -
Vra5g1581 647 SUPERFAMILY HAD-like 149 638 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1581 Vra-Chr5 22360241 22367050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1581 - - vun:114164304 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1581 5 22360241 22367050 Vra5g1581 5 22360241 22367050 ECH