Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1579 ATGACAGGCGAGGGAGGGAAAGGGTCGGGTTATGCAGTTGTGGTAGTCGTGGACTGCATTCTTACCTTGCCTTTCACTAACCCAACCCAAGAAGCTGAGCCATCTTTAATTCTAACCATGTCAGATAAAGTAAATGGGTTGCCCGAGGACCAAGCGTGGCAAGAGCTGAAGCTTCCAGAATTGCTCAACAGTGATGCTGTAAGAGAAATCCATGCAACCATTGAAAAAGAATGGGATTTCCTTAAGAGGTCAGCTTGCCAAACTGCTGCGGGAAGGGCTCTGTGGAAGCATGCCATCCATGATCCACTCGCTGATTTACTGGCAGGGGAGACTTACCTCAGAAACCTCCATGAAAAGATCAAGAACGACCGCCTCAACAATGCTCGTGAAATTTCTGGAGTCATTCTTGCAGTACGAACCCTCTGGTTTGATTCTAGGCTAGAAGATGCCCTCAATTCCCCTACTGCCAGAGCAGCTCAGGTTGTTCTCCTTGGCGCAGGAATGGACACGAGAGCATATCGTTTGAGTTGCTTGAAGGACAGTGATGTGTATGAGGTGGACTTTTCGGGAGTGTTGGATGTAAAGACCACTATTTTACAAGCGGCTGCGGACTCAGCGTACGACTCGCAACATACTATGTCCAAAGCCAAATCCTTAACCAGAGTAGCAGCCGACATAAGAGAAAATGACTGGATGGAAAAGCTTGAGACTGCGGGATACATACCTCAAAAGAGCACTGTTTGGATTCTAGAAGGTATCATCTACTACCTCACCCAGTCCCAAGCCATGCAAGTGCTGAGAATTTTGGCGAACAAATGCGCCTTAGCACACACAGTCCTTTTAGCAGACTTCATGAATAAGCCATCAACCACTCTATCCAATTCAGTCTTCCAATTTTACAGCGATTGGCCAGACCATCTATTGCCATCCCTAGGGTTCACTAATGTAAAACTTTCACAAATTGGAGACCCAGATGCCCATTTTGGTCTCTTAAATGATCCATTAAATCTCTTCAACAGGCTCCGCAGTTTGCCCAGATCGCTACAAACCAATCCAGACGATGGAAAGCCATGCTGCCGATTGTACTTGGTGGAAGCTTCTGGTTCACCTGATCAAAATGTTTCACATAATGGACCAAACACTCAGGCTTGA 1152 0.4661 MTGEGGKGSGYAVVVVVDCILTLPFTNPTQEAEPSLILTMSDKVNGLPEDQAWQELKLPELLNSDAVREIHATIEKEWDFLKRSACQTAAGRALWKHAIHDPLADLLAGETYLRNLHEKIKNDRLNNAREISGVILAVRTLWFDSRLEDALNSPTARAAQVVLLGAGMDTRAYRLSCLKDSDVYEVDFSGVLDVKTTILQAAADSAYDSQHTMSKAKSLTRVAADIRENDWMEKLETAGYIPQKSTVWILEGIIYYLTQSQAMQVLRILANKCALAHTVLLADFMNKPSTTLSNSVFQFYSDWPDHLLPSLGFTNVKLSQIGDPDAHFGLLNDPLNLFNRLRSLPRSLQTNPDDGKPCCRLYLVEASGSPDQNVSHNGPNTQA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1579 383 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 53 366 - -
Vra5g1579 383 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 53 366 - -
Vra5g1579 383 Pfam Leucine carboxyl methyltransferase 85 268 IPR007213 GO:0008168|GO:0032259
Vra5g1579 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 364 IPR029063 -
Vra5g1579 383 TIGRFAM mthyl_TIGR00027: methyltransferase, TIGR00027 family 96 276 IPR011610 GO:0008168
Vra5g1579 383 Gene3D Vaccinia Virus protein VP39 75 326 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1579 - - vra:106761019 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1579 5 22351568 22353958 Vra5g1579 5 22351568 22353958 ECH