Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1575 ATGGCTGACCGCATCTCTGCCACTCGCCTCCACCATATCTCTGCTGGACCTCCTTTTCAGATCTCCAAAGATTTCCATGGCCCTGACAATCCCATTCCACTTTCACCGCAATGGCTTCTGCCAAAGCCTGTGGAGAGTAAACCTGCAATAGAAACTGTGGAAAACCATGTGTTTTCAACTCCACCAAATGGCAAACGCTCAGAGATGGCTAAGACATTTGGAAATGGAGAGGACGTGAATGACGGCCTTAAGCGAAAGGATGTCTTCCGGCCATCCATGCTTGACTCTGAAAGTGGACACCATGATCGTTGGCGTGATGAAGAGAGAGATACTAAGTTTTCTTCCTCTTTACACAAGGATCGGTGGAGGAATGGAAACAAAGATGTAATTGACACTAGGAGAATGGATAGGTGGACTGAAAATCCATCAACAAGGCACTTTGGCGAAGCACATCGTGGCACATCTGATAGATGGAATGATTCGGGCAATAAAGATACAAACTTTGAACAGCGGCCCTGGAGTAAGTGGAACACACGCTGGGGACCTAATGATAAGGAGTCTGAAGATCTTCGTGAAAAATGGAGTGACCCTGGTAAAGATGGTGATCTTCATCTTGGCAAAAGTTTGTCTAACATTTCTTATCTTGTTAAGGATGAAAAGGAAGGGGATCCTTATCGGCCATGGAGACCCAACGCCTCACAAAGCCATGACCACCAAAATGTGATTCCAAACAAACAAGTGTCTGCTTTGTCATATGGGTGGGGCCGTGGGGAGGATACACCTCCAGTTGTGGCATTTGGGCGGGCCCGGTTTGGCTCTGGTGGTAATTCAATTAACAGCACATATATGCATTCTCAATACCCTGAAACTTTATTGGATAAAGTTGAAAGTGAACATGGAGAAGCTCATTGCTTTAGATATAATAGGACAAATTTGCTTGATGTGTACAGAGTTGCTGATATGCATACACATAGAAAACTAGTGGAATTTGTGCAGATACCTACTATTACACAGGATGAACCATTGAAGCCTCTAGGTTTTTGTGCTCCAAATTCCGAGGAACTGTCTGTGTTAAAGGATATTGAAAAGGGGGAAATAATCAGTAGCAGTGCTCCTCAGGTGCAAAATGATGGACGGAACACAACAGAATTTATACATTCAAGACGCATAAAGCTTGTAAATTCTCCTTTACAAGATAGAGTCGAAGATAACGGTTCTTACAGAATAGTGGATGAGGTTCCTAGTAATAGAGAATCAACCTTTGAAGAAATTAATTCTGTTCATCCTGGTGCTACATGGCGTGGGACCCCACTAGGTGAACATGCTGGCACAGTTGTGCATGAAAGCAGAGATGTGTCCAGTGATATTATATCAAGAAACCCAGATATGAGCTGGTCACACCAACCAAAAGATACTCAGGCTCAGTGGGAGCATAATTTGGATTATTTATCTGAAACTAGAGATGTGGCTAAGTGGCAATCTAGTGGATATCCCATTAAAAGGCAGCTATCTGGCATTTTGGATGGTGAATTCGAATCCAGGAGAGGTCAACAAACTTGTCCAGAGGATTTATCACTTTTTTATAAAGATCCTCAGGGTCACATTCAGGGCCCGTTTAAAGGAATTGATATTATTGGTTGGTTTGAGGCTGGTTACTTTGGTATAGATTTACCTGTTCGTCTGGAAAATGCAGCATGTCACTCACCATGGTTGCAACTTGGTGATGCCATGCCCCACTTACGAGCTAAGGCACGGCCACCACCTGGATTTTCTGCAGCAAAACACGACTCTACAGAGGCATTTTGTTGGCAAAATTCCAGTATCGCTGGGAACATGCATACTGGTTTAAATGAGGCTGAGAGGCTGAGAAATGATCCTATGCATAGGAATTCTGCCACTGAAGCTGAAAATAGGTATCTGGAGTCACTAATGTCCGGTAGCAAAAGCAGTTCCCCACTTGATAGTCTCACATTATCAGAAGGTTTACAGGGGTTTCACTGTAATAATTCTGGCAATTTAGGCCCATCAGGAGTAGATGGTGGAAACAACCTTTACATGCTGGCCAAGAAGATGGCTCTTGAACAGCTAAGTTCCTTGCCAACTCATCCTTATCCATACTGGCCAAGGAGGGATGCAGCACCCCTTCCGCCAAAATCAGACATTTTTCCAAATACACCACCACATTCAAATATCTCGTCTTCATTGAGTGACAATCCTCGTCAGCTTCAGCCCCAAAATTCTGATTTAAACTCAGTAACCCAAGGAATATCTGACAGGACGACCACAGGCTTAAGTAGCAGTATTGCTGGATGGCCTAATTTTCCTTTGCAAGGTGGATTGGATCCCCTTCAGAATAACATTGACTTTCATCATGATCAAAATTATGTTCAAATGCCATTTGGAATTCAACAAAGGTTACAAACACCAAACCGGTTGCCCTCAGACAACATAATTGCTCAAACTTCAGATATTCCATCAAGTATTTTGACAGCAGAGAAGTTGCTTTCTTCTGGCTTATCCCAAGATCCCCAAATGTTGAATATGTTGCAGCAGCAACACTTTCTGCAGTTGCATTCTCAGGCAGCGGCTTCTTCACAACAGATACCTTTCTTGGACAAACTTCTATTGCTGAAGCAGAAACAGCAACAGGAGGAGCAACTGCTGTTATTGCGCCAACAACAACTGCTATCTCAAGTGCTGCAGGAGCATAAGTCTCACCAGCGCCTAGGTGATTTATCTTTCCAGCAGTTGCCTGGAGGTGGAGTACCACTGGGGAATTTGCATGTGAATCTTTCTCAAAATCAACCACCAAAAGAGATTTTTTCCACAAGTTCTCAAACATCAATCCCCAGTGTGAATGGTGGGCTTACTAATAATTCTTTGAATTTACCTCTGCAAGCAAGTCGGGACACTAGCTATAATATAAGTAGTGAATCTTCTGTCCATATACCCGACCATTTATTTGAGAATATTAGTCATAAAAAAAGCTGGAGTGCTACACTTCCTAAGCAAATTAATGACAAGCACCAGAGTGTAGCATTGCCTGCATCAGCTTCTTTTGAAGACTCCGTGTTGAGTGTGCATAACATAGCTAAAGAGGAACCCAACATTGCCCAGATACCTCTTTCTTTTTCTGACAATTCTACTAAAATCATGGAGCAAATTCCATACAATACTTGTCCTGTCGGTGATTTTCAGGTGAGTGCAACTTCTGTGTTGGATGAGAGTTCTCAATCAGTACAGTTTGTTGCACCTTTTGTTCCTGTGTCTTCAGCTGGATCTTGTGGTACCGATTTACCAGTATCAAGTCAAGTGAGTATAGATATGGAGATTAAATCAGGCAGTCTTGAAGAGCAGCAGGTTGGGAGAGAAAGCTCAAATACCGAAACCTCTGTGGTGGATGCAAGTGGTGCTGAAGCACGGGAACCCAAAAAGGCTACTGAGAAGAAATCTAAGAAGCAAAAATCTTCAAAATCTCAGTCTTCTGATCAGGTAAAGGGCTTGCCAAAAAATGTGACTTTGCAGCAGTCAAAGAAATCAGAATCTGAGAAACCAAATTATGGTGAAAAAAAATTGGGAGAAACCAACAAGGGTGAACCAGCTCATGAGACATGTCTACAACAAACAAGGGGTAAGGGTAAACAATCTGCAACTGCTACTTCAGAAACAGATAATCATCAAGAACTTAATGGTCTCCCTACTAATATTCCAGGAAGCAACTCTGAAACATTTATTGAGGATGAGTTGAAAGCAGTCGGTTCTGTTTCCACCAAGACTAGTGAATTACCTTCAGGGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCAAAATCTCTCTTAGAAATTCAACTGGAAGAACAAAAAAGGGCACAGATAGAAATGCTTGTGTCTGAGGTTGCTACTCCTGTCAATGCCATGAGTTCAACAACTCTTTGGGTGGGAGTTATGGCCAATCCAGACTCTTCGAAGGTGTCTAGTGATAATCACAGAGAAGCAGATGATACTGAATATCTGGCTAAATCTGAAAAATCTCAAGATAGTAAAACCAAGAAAAGCCCATTACATGATCTATTGGCAGAAGATGTATCAAAATATAGTGAAAGAGATGGCAGGGTTCCAGACAGCTTGATCCCCTCACAAACTGTTCATTCTCATTCAGAACCAATAGATGAAGGAGACTTCATTGAAGCTAAAGACACCAAAAGAAACCGGAAAAAATCTGCAAAGTTGAAGGGTTCAGGGTCTAGGGTTTCAATTCCTGTTGCTTCTAGTGAAAGGCCCATAAGTTCGAGTCACAATGAAAAGGTAAGGAGCTCCCATTCTGTTCAACTGGAGAAAGAACAACTTCCTTCTATCCCTTCAGGACCCTCTCTGGGAGATTTTGTTCTTTGGAAAGGGGAGCTGACAAGTCCATCTCCTCCTCCAGCCTGGACTACTGATTCTGGTAGGATACCTAAACCAACATCATTAAGGGACATTCAAAAGGAGCAAGAGAAGAAATCTGCTGCAGTTCTCCCAAACCAACTTCCTACACCTCAGAGATCACAGCCTGCCCAAGTTGCTCGGAGCAGCAGTTCTATATGGCCAATTTCAACTTCATCTCCACCAAAAACTGCACCTTCTACCCAGATAAACTCCCAAATTTCTGTGTCGAAATATAGAGGGGATGATGAATTGTTTTGGGGTCCAGTTGAGCAATCTAAGCAAGAAAATAAGCAATCAGGCTTCTCTCAGCTTGCTAGCCAGGGTAGCCGGGGTTCTAAAAATATCCCCATGAAAGGTAATTCACCTGGATTATCAAGTCGACAAAAGTCTGGGAGTGGCAAACCAGCTGAGCGATCTCTTTCATCCTCACCTGCCTCTTCTCAATCACTGCTAAAACTGAAAAAGGATGCTATGACTAAGAATTCCGAAGCTACGGACTTCAGAGTTTGGTGTGAGAATGAATGTGTCAGGCTTATTGGGACAAAAGATACAAGTTTCCTTCAGTTTTGCTTGAAGCAGTCCAGATCTGAAGCAGAGATTATTCTCACGGAAAACCTGGGATCATATGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGACTTGCTACCATCAGATGTTTTGGAAATAGCATTTCAAACTCGGAATGATCAGAAAGTTGATGGATCTGAAAACACAGTTGTACAAGATATGGGTTACGTTGACGGATCCTTCTCAAAAGGTGGAAAGAAGAAAGGTAAGAAAGGAAAAATGGTCAGCTCTTCAGTTTTGGGATTCAATGTCGTGAGTAACCGGATAATGATGGGTGAGATTCAGGCGGTAGATGACTAA 5325 0.4263 MADRISATRLHHISAGPPFQISKDFHGPDNPIPLSPQWLLPKPVESKPAIETVENHVFSTPPNGKRSEMAKTFGNGEDVNDGLKRKDVFRPSMLDSESGHHDRWRDEERDTKFSSSLHKDRWRNGNKDVIDTRRMDRWTENPSTRHFGEAHRGTSDRWNDSGNKDTNFEQRPWSKWNTRWGPNDKESEDLREKWSDPGKDGDLHLGKSLSNISYLVKDEKEGDPYRPWRPNASQSHDHQNVIPNKQVSALSYGWGRGEDTPPVVAFGRARFGSGGNSINSTYMHSQYPETLLDKVESEHGEAHCFRYNRTNLLDVYRVADMHTHRKLVEFVQIPTITQDEPLKPLGFCAPNSEELSVLKDIEKGEIISSSAPQVQNDGRNTTEFIHSRRIKLVNSPLQDRVEDNGSYRIVDEVPSNRESTFEEINSVHPGATWRGTPLGEHAGTVVHESRDVSSDIISRNPDMSWSHQPKDTQAQWEHNLDYLSETRDVAKWQSSGYPIKRQLSGILDGEFESRRGQQTCPEDLSLFYKDPQGHIQGPFKGIDIIGWFEAGYFGIDLPVRLENAACHSPWLQLGDAMPHLRAKARPPPGFSAAKHDSTEAFCWQNSSIAGNMHTGLNEAERLRNDPMHRNSATEAENRYLESLMSGSKSSSPLDSLTLSEGLQGFHCNNSGNLGPSGVDGGNNLYMLAKKMALEQLSSLPTHPYPYWPRRDAAPLPPKSDIFPNTPPHSNISSSLSDNPRQLQPQNSDLNSVTQGISDRTTTGLSSSIAGWPNFPLQGGLDPLQNNIDFHHDQNYVQMPFGIQQRLQTPNRLPSDNIIAQTSDIPSSILTAEKLLSSGLSQDPQMLNMLQQQHFLQLHSQAAASSQQIPFLDKLLLLKQKQQQEEQLLLLRQQQLLSQVLQEHKSHQRLGDLSFQQLPGGGVPLGNLHVNLSQNQPPKEIFSTSSQTSIPSVNGGLTNNSLNLPLQASRDTSYNISSESSVHIPDHLFENISHKKSWSATLPKQINDKHQSVALPASASFEDSVLSVHNIAKEEPNIAQIPLSFSDNSTKIMEQIPYNTCPVGDFQVSATSVLDESSQSVQFVAPFVPVSSAGSCGTDLPVSSQVSIDMEIKSGSLEEQQVGRESSNTETSVVDASGAEAREPKKATEKKSKKQKSSKSQSSDQVKGLPKNVTLQQSKKSESEKPNYGEKKLGETNKGEPAHETCLQQTRGKGKQSATATSETDNHQELNGLPTNIPGSNSETFIEDELKAVGSVSTKTSELPSGRAWKPAPGFKAKSLLEIQLEEQKRAQIEMLVSEVATPVNAMSSTTLWVGVMANPDSSKVSSDNHREADDTEYLAKSEKSQDSKTKKSPLHDLLAEDVSKYSERDGRVPDSLIPSQTVHSHSEPIDEGDFIEAKDTKRNRKKSAKLKGSGSRVSIPVASSERPISSSHNEKVRSSHSVQLEKEQLPSIPSGPSLGDFVLWKGELTSPSPPPAWTTDSGRIPKPTSLRDIQKEQEKKSAAVLPNQLPTPQRSQPAQVARSSSSIWPISTSSPPKTAPSTQINSQISVSKYRGDDELFWGPVEQSKQENKQSGFSQLASQGSRGSKNIPMKGNSPGLSSRQKSGSGKPAERSLSSSPASSQSLLKLKKDAMTKNSEATDFRVWCENECVRLIGTKDTSFLQFCLKQSRSEAEIILTENLGSYDPDHEFIDKFLNYMDLLPSDVLEIAFQTRNDQKVDGSENTVVQDMGYVDGSFSKGGKKKGKKGKMVSSSVLGFNVVSNRIMMGEIQAVDD* 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1138 1159 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1504 1547 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1566 1623 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 724 762 - -
Vra5g1575 1774 CDD GYF 523 580 IPR003169 GO:0005515
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1318 1547 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1160 1181 - -
Vra5g1575 1774 SMART gyf_5 524 579 IPR003169 GO:0005515
Vra5g1575 1774 MobiDBLite consensus disorder prediction 933 955 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 141 164 - -
Vra5g1575 1774 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1774 - -
Vra5g1575 1774 Gene3D - 512 596 IPR035445 -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1114 1240 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1182 1198 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1118 1134 - -
Vra5g1575 1774 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1774 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1208 1240 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1386 1403 - -
Vra5g1575 1774 ProSiteProfiles GYF domain profile. 523 574 IPR003169 GO:0005515
Vra5g1575 1774 MobiDBLite consensus disorder prediction 181 203 - -
Vra5g1575 1774 SUPERFAMILY GYF domain 517 580 IPR035445 -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 715 762 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 141 206 - -
Vra5g1575 1774 MobiDBLite consensus disorder prediction 1324 1371 - -
Vra5g1575 1774 Pfam GYF domain 527 564 IPR003169 GO:0005515
Vra5g1575 1774 MobiDBLite consensus disorder prediction 93 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1575 Vra-Chr5 22312657 22321556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1575 - - gmx:100797445 2549.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1575 5 22312657 22321556 Vra5g1575 5 22312657 22321556 ECH