Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1574 ATGACAAAGAGAGGGATCCGTGATGCTGATTCTGGAAACGCCGACCGTAAGAGGCACTTCTTATTTTGGGTCTTAGCAGTGGTTATCCTCGTTGCTCTATGGACCATGTTCGCTGGCTCCGTCACGCTCAAATGGTCCACGACCAACAACGATGATTTCGATTCTACCATTTTTCAGGATCTCGATGTGCTCGAGGTGGAGGAGAGAGAGAAGGTTGTGAGACAGATGTGGGATGTGTACAGTCGCACTCGGACGAACTACGTTGGATTACCCAAGTTTTGGTGGGAAGCCTTCGAAGCAGCTTACGAGGAATTGGTGAGTGATGTTCGTGAAGTTCGAGACGGTGCCGTTTCAGAAATTGCTAAGATGTCTCTTCTGCGATCTCTTCCTCTTCAATCGCACCCGAGCATGAAGGGAACAGAGAGTAGGAATGTGACGAATAACTAG 447 0.4877 MTKRGIRDADSGNADRKRHFLFWVLAVVILVALWTMFAGSVTLKWSTTNNDDFDSTIFQDLDVLEVEEREKVVRQMWDVYSRTRTNYVGLPKFWWEAFEAAYEELVSDVREVRDGAVSEIAKMSLLRSLPLQSHPSMKGTESRNVTNN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1574 148 PANTHER PROTEIN, PUTATIVE-RELATED 12 139 - -
Vra5g1574 148 PANTHER OS03G0411600 PROTEIN 12 139 IPR010608 -
Vra5g1574 148 Pfam Protein of unknown function (DUF1195) 17 129 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1574 Vra-Chr5 22310683 22311991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1574 - - gmx:100500653 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1574 5 22310683 22311991 Vra5g1574 5 22310683 22311991 ECH