Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1568 ATGGAGACATTTTATTCTTCTCAACGAGAGAGCATTCTTTTAGGTTATAATAATCATAATAATAATAGTTATGAGAATGGTAATAATTCCTTGATTCGGAGGTCGTCGTCCAGCAATTTGAACTTGGAGGTTGATTTCAACGATGTCTTTGGGGGGCCGCCGCGGAGGTCATCGTTAAACGAAGCGCGGCAGAGTCTGACCGAGTTGAACGGTTGGAGCGAAGAGGAAAGGGAAAAAGGTTGGTGTAGGTGGCCGCCGGAGCGGGAGAAACCGGTGTTTGGAGAGGATATTGGAAACCGGAGGCGTCACGCGAACAAGAACAATGACTTCTTCGATGACATATTCGGAGGTGAGGAGTCGGCGAGTGTGTGTTCTACGCCAAAGAGACGCGTTGGGGACCCTTTCACGTTCTCTCGAGTGTCCAGTCCTCTGCCTCCGGCGGCCGATCCCGTTGCTGCCTCTCTCCCTCTACCATTCAGCCTTCCGGCCAAATTGACAAATGGGGTGGATCTTCCAACATTTGGTTCCCCCATGAGGACCAACAACATCAACGATGGTAATGCCGCTTCAAATGGACTAGGCCTTCCAGATTCTTATTCATCCAGATTTTCAATCCAGCGAAAGGAGTTGAAAAAGGATTTAAAACCTTACCGACAAAGTCTTCTATCACAGGAGTTTTCAAACTCGAGCCCATCTGATAAAGCAGACAAAGCAAGCATCATGAAACAAGACATATCTATTAGCGAAGTTTCACCTGGTGCTAGTAATGGTCAATTCCATTTCTCAATATACAAATGGGCAAGTAAAGGTGTGCCAATGGTGATGTCTCTTAGGACAGAAAGAGCCTCAAAGGCTAAGGATAAGGTTAAACTTGAGAGAGGCTCAAGTACTAAAGAATGGGTTGTCAGTGAAATTACCACACAAAAGTCTATGCCATACAATGGTTCCTCTGTGATGAATAATGGAAAAGATGCATATACTACTTCCACAGCCACTGAAAATGGAGCAGATTCAAACCAGACTGTAGAACAAATAGTTTCCGCCAAGGCTCAATCACGTGCATCATGCGGCCCTCAAACGGTTACCATAGATGTTCCCGCCAGTTCTATCCCGCGTGACGACGATAGAGCAGTAGAATCAAGTACTCATTCTGCAGGTGAGAACGGCTTCTCCGGAAAAACTGAGACAACAAGGGATACTCAGAAGCTTGAGTCTAAACCTTTACAGTTTCTGTTCAAAGAAAGTGATAAGAAACAAGATAATAATCAGATGATTAGGGATAAAGAAGAAAACAGGATGAAAAGCACAAAAAAATTGTCTGCTGTTTTTGATGTTACTGTGAATCCCATGAAACAAGAAGAAAAGAAAGTTTCCGTGATAGATGTAGGACATGACAAAGCCACTTCTCAGGGTTCAGTAATCTTAGGTGAGAATATGGGGAAAGGCCTAGTTAAAGGAAAGGTCAAAGAATTCGCTCGAATTTTCAACCAAGAAACTGCTGCAAAACCAAAAGTTGACACCAAATCTCGACCTCAGGGTTCTACACACAAGCAGAGAGATGCTTTAAGGAAAAAAAATAAAGTAGAACGTGGTCCTGAACAATCCAAGGAGGAAAACTCTACCATAGAGACCACCAACATATCTGCTGACAATTTGCCTCATCAAGAGGATATATCAGAACCAGCAATTCCTGATGTATCATTTTCTGTTATTGGAGATAAAGACGAGTCCTTCCACGGGAGTTTCATGATCCAAGTATTAGCCCAAGATGAGAGTGAGGACTTACAAAATCATGAAATCCAAATGATTGACAAGAAGATAAAACAATGGTCTAAAGGGAAGGAAGGAAACATACGATCCCTGCTATCGACATTACAACATGTACTTTGGACGGAGTGTGGATGGAAGTCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCGGTTAAAAGATCTTATCAAAGAGCTTTACTCTGCCTGCATCCCGATAAGTTGCAGCAAAAGGGTGCTTCTTCAGACCAGAAATATATCGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGCTTGGTGCACTCTAA 2097 0.4297 METFYSSQRESILLGYNNHNNNSYENGNNSLIRRSSSSNLNLEVDFNDVFGGPPRRSSLNEARQSLTELNGWSEEEREKGWCRWPPEREKPVFGEDIGNRRRHANKNNDFFDDIFGGEESASVCSTPKRRVGDPFTFSRVSSPLPPAADPVAASLPLPFSLPAKLTNGVDLPTFGSPMRTNNINDGNAASNGLGLPDSYSSRFSIQRKELKKDLKPYRQSLLSQEFSNSSPSDKADKASIMKQDISISEVSPGASNGQFHFSIYKWASKGVPMVMSLRTERASKAKDKVKLERGSSTKEWVVSEITTQKSMPYNGSSVMNNGKDAYTTSTATENGADSNQTVEQIVSAKAQSRASCGPQTVTIDVPASSIPRDDDRAVESSTHSAGENGFSGKTETTRDTQKLESKPLQFLFKESDKKQDNNQMIRDKEENRMKSTKKLSAVFDVTVNPMKQEEKKVSVIDVGHDKATSQGSVILGENMGKGLVKGKVKEFARIFNQETAAKPKVDTKSRPQGSTHKQRDALRKKNKVERGPEQSKEENSTIETTNISADNLPHQEDISEPAIPDVSFSVIGDKDESFHGSFMIQVLAQDESEDLQNHEIQMIDKKIKQWSKGKEGNIRSLLSTLQHVLWTECGWKSVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVFDILQEAWTQFNMLGAL* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1568 698 MobiDBLite consensus disorder prediction 503 537 - -
Vra5g1568 698 MobiDBLite consensus disorder prediction 409 435 - -
Vra5g1568 698 PANTHER J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 1 692 - -
Vra5g1568 698 SUPERFAMILY Chaperone J-domain 568 692 IPR036869 -
Vra5g1568 698 Gene3D DnaJ domain 593 697 IPR036869 -
Vra5g1568 698 MobiDBLite consensus disorder prediction 501 550 - -
Vra5g1568 698 MobiDBLite consensus disorder prediction 350 366 - -
Vra5g1568 698 MobiDBLite consensus disorder prediction 382 396 - -
Vra5g1568 698 MobiDBLite consensus disorder prediction 350 435 - -
Vra5g1568 698 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1568 Vra-Chr5 22258768 22266105 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1568 - - gmx:100820241 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1568 5 22258768 22266105 Vra5g1568 5 22258768 22266105 ECH