Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1567 ATGGAGTCGGAACTCAAAGACCTCAATTCCAAGCCTCCCAACGGCAGTTCCTCCAGGGACGACCGTCCTCTCCTCAAGTCCGAGTCTCTAGCCTCCGCTGACAGCATCGCCGAGATGGAGAAGAAGTTCGCTGCATACGTTCGCCGCGACATCTACGGCACCATGGGACGCGGCGAGTTGCCGCCGAAGGAGAAGCTCTTGCTTGGTTTCGCGTTGGTCACTCTTCTCCCTATCAGAGTTCTTCTCGCGGTCACCGTATTGCTCTTCTATTACTTAATTTGTAGGGTTTGTACTCTATTCTATGCGCCCAATCGCGAAGATGAACAAGAAGATTACGCTCACATGAGTGGCTGGAGGAGAGCGGTTATTGTTTCCTGTGGACGCGCCCTCTCCAGAGTCATGCTCTTCATCTTTGGCTTTTATTGGATCACCGAATCTAACTCTGCTTCCCAGGAAGACAAGCAACAGCCTGAAGAGTCGGACAGACCTGGTGTAATAATATCTAACCATGTGTCATACCTGGACATTTTGTATCACATGTCATCCTCGTTCCCTAGTTTTGTTGCTAAGAGATCAGTGGCTAGACTTCCTCTCGTCGGTCTCATCAGTAAGTGCCTTGGTTGTGTCTATGTTCAGCGGGAATCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTATTGTCACTGATAGAATTCGAGAAGCTCATCAGAATGAGTCCGCTCCATTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGAGTTCCTCCTTCCATTCAAAACTGGTGGTTTTTTGGCAAAGGCACCAGTACTTCCTGTGATTTTAAGATATCATTACCAGAGATTTAGCCCTGCCTGGGATTCCATATCTGGGGTGAGGCATGTGATATTTCTCCTGTGTCAATTTGTAAATTTCATAGAGGTGATCCGATTACCTGTTTACCATCCTTCACAACAGGAGATGGATGACCCCAAACTTTATGCCAATAATGTTAGAAGATTGATGGCTTCTGAGGGTAATTTGACACTTTCTGATATTGGGCTTGCTGAAAAACGAACATATCATGCTGCTCTCAATGGTTTGTTTTCCCAATGCTAA 1101 0.4632 MESELKDLNSKPPNGSSSRDDRPLLKSESLASADSIAEMEKKFAAYVRRDIYGTMGRGELPPKEKLLLGFALVTLLPIRVLLAVTVLLFYYLICRVCTLFYAPNREDEQEDYAHMSGWRRAVIVSCGRALSRVMLFIFGFYWITESNSASQEDKQQPEESDRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVARLPLVGLISKCLGCVYVQRESKSSDFKGVSAIVTDRIREAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNFIEVIRLPVYHPSQQEMDDPKLYANNVRRLMASEGNLTLSDIGLAEKRTYHAALNGLFSQC* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1567 366 SMART plsc_2 164 279 IPR002123 GO:0016746
Vra5g1567 366 Pfam Acyltransferase 158 274 IPR002123 GO:0016746
Vra5g1567 366 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 15 362 - -
Vra5g1567 366 MobiDBLite consensus disorder prediction 1 25 - -
Vra5g1567 366 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 70 344 - -
Vra5g1567 366 CDD LPLAT_LPCAT1-like 132 353 IPR045252 GO:0008374
Vra5g1567 366 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 15 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1567 Vra-Chr5 22252164 22258078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1567 1 365 Acyl Lipid Metabolism Gene Families AT1G80950 64.962 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1567 K13510 - gmx:100820536 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1567 5 22252164 22258078 Vra5g1567 5 22252164 22258078 ECH