Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1561 ATGGCTCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAGCTTAGATTTGCTGTGGTTGTTTTCGTGATTATATTGATATTGGCGTGGGTGGAGGCCCACAAAGCAAATCTCCACGAACACCAACTTCAGGGAGACTTGGAGAGGAATACTGAGAACATTGCCACCCACTCTTGCATACATGATCAGATTCTTGAACAGAGGAAGCGGCCTGGGCGAAAGGTGTATTTAGTTACCCCACAGGTTTATGAGCCCAGTCGCTTAAAACATCTTCAGCACAGAGGTAGGGCATTACTTGATGTGACAACCTCTTCAGGTTGTCAAGAGGATACAAAGAAGCCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGGGATTGTCGAGCAGTTGGCGATATTGTTAAACTCGGGGAGCCTCCCATGACTTATCCTCCTGGTTTTCCTTCTTGTGATCCCCATGGCAATCCTCCGATATTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACGTCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCGGTTGAACCTGTCAAGGGGAACTTGCGTTTGAGTGGGTATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATTGAGGAGGGTGTCTCTGATGCTGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGTGAGCGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGCCATTTGACTGCCGAGGCAGAGACTTTACTTTCCGCTACTCTTATACACGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTAATCAGGTTACCGAACAAGTTATGGATGAAAAGCTTGGACGAGTGGTAACACGTGTGGTGCTTCCTCGCGTTGTCATGCATTCTCGATATCATTATGCGGCGTTCTCAGGGAATTTTTCTGGTTTGGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGATCTCACTGGGAAAAAAGGCTTCTGATGAATGAAATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTCTATTAGAAGATAGTGGATGGTACAAAGCCAACTATAGTATGGCAGACCGTCTTGATTGGGGTCTCAACCAAGGTACTGAGTTTGTTACATCCCCTTGCAATCTTTGGAAGGGAGCCTATCGTTGCAACACAACACAGTTTTCTGGCTGTACATATAACAGGGAGGCAGAGGGATACTGCCCTATCCTAACTTATAGTGGAGATCTCCCCCAGTGGGCTCGGTATTTTCCGCAAGCTAATAAGGGCGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAACAGTGCTCGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCATTAGTACGGACTGGCTTCGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGATGTATTAATAATTCTTTGGAGGTTGCAGTGGATGGCATCTGGAAAGTGTGTCCTCAAACTGGTGGACCCATTCAATTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCCTACCATGAGCTTTGTAACACTGACCCAATAGCTGTGTCTGGTCAATGCCATAATTCATGTAATTTCAATGGAGATTGTGTTGATGGAAAGTGCCGATGCTTTCTTGGATTTCACGGGAATGATTGCAGTAGACGTTCCTGCCCCGGCAAATGCAATGGCAATGGAATGTGCCTTTCTGATGGGACTTGTGAATGTAAACCTGGCTATACTGGCATTGATTGCTCCACTGCTGTGTGTGACGAGCAATGTAGCCTTCACGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGCTGTTCTGACTATGCGGGTTATACATGCCAGAACAGCTCCATGCTCCTCTCTAGTCTTTCTGTGTGCAAAAATGTGCTGGGAAATGATGTTTCTGGGCAGCATTGTGCGCCCAGTGAGCCTAGCATTCTTCAACAGCTGGAAGAAGTAGTTGTCTTACCCAACTACCATCGATTATTCCCTGGAGGTGCTAGGAAACTATTTAATATATTTGGCAGCACCTACTGTGATGAGACTGCTAAACGTCTTGCCTGCTGGATCTCGATCCAGAAGTGTGAGAAGGATGGAGATAACAGGCTTCGGGTATGCCATTCTGCATGCGAATCTTATAATCTGGCTTGTGGAGCTTCACTTGACTGCTCTGATCAGACCCTTTTCAGCCGTGACGGGGAAGGGGAGGGTCAATGCACTGGCTCTGGTGAGATGAAAATGTCATGGTTTAATCGTCTACGAAGCACATTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAGATATAGGAAGCTTTAG 2571 0.4594 MARCTSCALSRFHCKLRFAVVVFVIILILAWVEAHKANLHEHQLQGDLERNTENIATHSCIHDQILEQRKRPGRKVYLVTPQVYEPSRLKHLQHRGRALLDVTTSSGCQEDTKKPIRIYLNYDAVGHSPDRDCRAVGDIVKLGEPPMTYPPGFPSCDPHGNPPIFGDCWYNCTSEDISGEDKKRRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRVVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGLNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPQTGGPIQFPGFNGELICPAYHELCNTDPIAVSGQCHNSCNFNGDCVDGKCRCFLGFHGNDCSRRSCPGKCNGNGMCLSDGTCECKPGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVLPNYHRLFPGGARKLFNIFGSTYCDETAKRLACWISIQKCEKDGDNRLRVCHSACESYNLACGASLDCSDQTLFSRDGEGEGQCTGSGEMKMSWFNRLRSTFSLRNSSLKGISVRYRKL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1561 856 Pfam Leishmanolysin 170 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vra5g1561 856 Gene3D - 108 299 - -
Vra5g1561 856 Gene3D Leishmanolysin domain 3 437 496 - -
Vra5g1561 856 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Vra5g1561 856 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 2 827 - -
Vra5g1561 856 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
Vra5g1561 856 Gene3D Laminin 633 700 - -
Vra5g1561 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 599 - -
Vra5g1561 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 2 827 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vra5g1561 856 Gene3D Leishmanolysin , domain 2 309 434 - -
Vra5g1561 856 Gene3D Leishmanolysin domain 4 498 591 - -
Vra5g1561 856 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Vra5g1561 856 SMART egf_5 603 631 IPR000742 -
Vra5g1561 856 SMART egf_5 634 663 IPR000742 -
Vra5g1561 856 Gene3D - 592 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1561 Vra-Chr5 22184634 22193104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1561 K01404 - gmx:100775874 1700.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1561 5 22184634 22193104 Vra5g1561 5 22184634 22193104 ECH