Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1560 ATGGAGAGCATCAAATATTGGCTAATACAACACCCTTCTGTTGTCTCCTTCCGCTGGACTCCAACCCAATTATACGGCGCCACATGGTCCTTCCTCGTCTCCGCCGTTTCTTTTTACATCACCGCCGCCATCATCCTCCACCTCCTCCTCAAACTCTCCCGTCGCCGTCGGTCGTTTCCGTTAGGACCTATCCCCGCCCTCCACAGCCTCATCATGTCGTTAATCTCCGTCGCGATATTCACCGGCACGCTCTTCTCCGCCGAAGCGGAAGCCCGCGACACGCGGTGGCTGTGGCGGCGCAGCAGAACCACCTCTTTCGAGTGGCTCCTCTGTTTCCCTCTAGGTACTCGTCCGTCCGGTCGTGTTTTCTTCTGGTCCTACGTTTTCTACCTGTCACGCTTTCTTCACCTTCTGCGCACCTTCTTCGTGGTTTTGCGTGAGCGTAGGCTGTCGTTTTTGCGACTGTTTAACAACTCCGTACTCCTGGTGATGTCGTTTCTGTGGCTGGAGTTTTCACAGTCGCTTCAGGTGCTGGCCATTCTGTTTTACACGTCGGCTTATTCCGTCGTTTGCGCGTTCCGGTTCTGGACGGAGCTAGGGTTGCGCAGCAAAACGCCGTTGTGGCTCACCGCGAATTGCCAGCTGGCACTGTTGGGTTGTAATTTGGCGTGCCACGTTGGCGTGGTCTCGCTCCATTACTTGAGAGGAGGGTGCAACGGAATCGGAGCTTGGATTTTCAACTCTCTCTTAAACGCCGGCTTTCTGGTTCAGTTCTTGAAATCCTACGTGAAAACGCATTCACAAAGGAAAAGTGCTTCCTCTTCTTCTGCATAA 834 0.5384 MESIKYWLIQHPSVVSFRWTPTQLYGATWSFLVSAVSFYITAAIILHLLLKLSRRRRSFPLGPIPALHSLIMSLISVAIFTGTLFSAEAEARDTRWLWRRSRTTSFEWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFVVLRERRLSFLRLFNNSVLLVMSFLWLEFSQSLQVLAILFYTSAYSVVCAFRFWTELGLRSKTPLWLTANCQLALLGCNLACHVGVVSLHYLRGGCNGIGAWIFNSLLNAGFLVQFLKSYVKTHSQRKSASSSSA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1560 277 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 3 273 IPR002076 GO:0009922|GO:0016021
Vra5g1560 277 PANTHER F25A4.4 3 273 - -
Vra5g1560 277 Pfam GNS1/SUR4 family 28 272 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1560 Vra-Chr5 22181440 22182433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1560 1 276 Acyl Lipid Metabolism Gene Families AT1G75000 60.498 1.44e-114 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1560 - - gmx:100790930 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1560 5 22181440 22182433 Vra5g1560 5 22181440 22182433 ECH