Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1542 ATGACTGTCTTTCACTTCTTTAACTGCGCGATTCTCACCTTCGGTCCCCACGCCGTCTACTATTCCGCCACGCCCTTATCTGAGTATGATACACTCGGCACCTCTATCAAAGCCGCTGTAGTTTATCTTGCGACGGCGTTAGTGAAGCTTATTTGTTTAGCTACCTTTCTCAAGGTATCGGAGAGTGATAGCTTTGATCCGTATCAGGAGTTTTTGAAGGCATTAATAGGTTTTATAGATGTTGCCGGGCTTTATTTTGCCTTGACCCAGTTGACTCACAGGAATATCTCGCAGAATCATAAATTTCAAGCAGTTGGACTTGGCTGGGCGTTTGCTGACTCTGTACTGCATCGGTTGGCTCCTCTTTGGGTTGGGGCCAGAGGATTAGAATTTACTTGGGATTACATTCTCCAGGGCCTTGAGGCTAATGCGAATTTGGTGTTGAGCATATCCCTTGCTGCACTTGGATCTTTGATGTGGCTTCGAAAAAATAAGCCAAAGACCCTCATCCCTATTATTTATTTGAGTGCCGGGATTGTAGCAACGATGCCATCTATCACAAGCTATCTGAGGCGTGGATTGGGGTGGCACTTTCCTAAAGTGGTAGGCTTTGAGCTGTTCACATCTCTGGTGATGGCTTTTATTAGCTGGCAACTGTTTGCTGCGTGTCAGAGACCCTCGGTGTGA 687 0.4643 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATALVKLICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYLSAGIVATMPSITSYLRRGLGWHFPKVVGFELFTSLVMAFISWQLFAACQRPSV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1542 228 Pfam Predicted membrane protein (DUF2053) 2 161 IPR019164 -
Vra5g1542 228 PANTHER SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN 1 228 IPR019164 -
Vra5g1542 228 PANTHER BNAA08G03740D PROTEIN 1 228 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1542 - - gmx:100814690 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1542 5 22029766 22033512 Vra5g1542 5 22029766 22033512 ECH