Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1541 ATGGCCATGGCCACAGCTGTCGTATGTCCTCAGAACATCACCGGCGGAGCCGTCGTCAGCTCACCTGCCAAGACCAAGAAGAGAATGAACAGAGTGGTACAGATAAGAGGCCTTAATTCATTTGGGGGACTCAAGGCTAGCAATGATGTTGTGGCCTTGGGACTACCCTTGAGCACTGAGAAGGGTTTCGCCAAGATTGTGAGCTCGGTGAAAGCAACAGCATCCAATGGAAAAGGAAAGGGAGGAGGAGCGCTTTCATCCACTTGCAATGCCGCCGGTGAGATATTCACAATTGCTGCTATCATCAATGGCCTTGTTCTTGTGGGGGTTGCTGTTGGCTTCGTGCTCCTGCGAGTTGAAGCGTGGGTGGAGGAGTCTGAGGCAGAGTGA 390 0.5256 MAMATAVVCPQNITGGAVVSSPAKTKKRMNRVVQIRGLNSFGGLKASNDVVALGLPLSTEKGFAKIVSSVKATASNGKGKGGGALSSTCNAAGEIFTIAAIINGLVLVGVAVGFVLLRVEAWVEESEAE* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1541 129 Pfam PetM family of cytochrome b6f complex subunit 7 93 120 IPR012595 GO:0009512
Vra5g1541 129 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 122 IPR012595 GO:0009512
Vra5g1541 129 PANTHER REDUCTASE, PUTATIVE-RELATED 1 128 - -
Vra5g1541 129 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 128 - -
Vra5g1541 129 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1541 Vra-Chr5 22028246 22028933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1541 - - gmx:100306520 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1541 5 22028246 22028933 Vra5g1541 5 22028246 22028933 ECH