Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1535 ATGGGTGCAGAGTCACAAATTCCACGAAGCTTAATCCACAGAATCTACGCTCCCTTGGCTAACGAATTTCATTTTGCACCACCGGTCTCTTCATCCAGAACAAACGAACTCGAACTTGTTCGCGGTGTTCTACGAATGCTGCAAGGGTTTTCTGGTCCCCTGTTCTCTTGGGATAAAAGTGCAAACAGTTTCCGTGCAAAGAGCGGTGTTTACGTTAGCCATCTCTCACAGAAAAGTCTCCACTCTCTTCTCAACCAGTTTATCCACGCCGCTACGTGTCTCCAATCCGTGGCGATTACACTCGATAAAATTGAATCTGCAGTGCCGAAGTCTCCCCCTACTTTGAACGCGTTCGCGTCCTCTGCTTCAGCGTGCCTTCAGCGGTTACGGAATCTTGCCTTGAAGGAGGAAACGTCCTCGAGCAATGCAGATGGAATAACCACTCCAACCTTGTTAGGATTGACCAATTCCTTATCGAGTCTTTGCTCAGGGGCTGAATTTCTATTTCAGGTAGTGCATGAGGCCATTCCTGCTGTATACTTTGAGTTTGGTGTGTCTTTACCAGCAGCAGAACTCACTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTGGTACAAGGTGGTGAGGAGGAAGCTAATCAGATGATGCTTTATATGTATGTTGGAAGCTTGTTGCCGTATATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGGATTCTTGATGATCCTTTTGGTGAGATGTTCTTTTTCACTAATAAAGAAGTCTCAGTTGATGAGGCCGAGTTCTGGGAGGAGAGTTATTTATTAAGAATATTACAGCATAGCAAGTTAAGTTCAGAATTCTCTTCCACAAATTATGGCAACGATTCAACCACAGCATCAGATTACAAGGAAATGGACGGGAGGGATTCCGTCTCTTTGTCTGGTACAATTAAAGGAAAAGAGCCAAGCATTAGAGACCGTCCAGCTTGTCCCTTTTTTATTAACGACTTAGCCAAATCAATAATTTCTGCTGGAAAATCTTTGCAGCTTATGCGCTATGTACCTAATTCCTCAGTGAATTGTACCAAAGAAAGTAATTATGAGGGTGGAAGTGCCAAATGTTTAAACTATGGTTTATATCCTACTCAGAGAATGGCTGGGCTAACCTTGCCGGAAATTTTTTCTGTATCACTAGTTGGACTTCTTGGTCATGGTGACCATGTCTGTAAGTACTTTTGGCAAGAGAACTGGTACGATATTGTAACTGTTTCTTCGCATGCATCTTATGTAAATGAGGAAAAAATAGATAAAGACAATAATGAAAAATTAATTGCTCCACCTTATTTAGAGAAGACTTGGTATAAGTTCTTGATTGATACATTATTTCAGAAAAGATCAGCTGACATAAAGCTAAAATATGAACACATAAATAATGACACATTAGAGCTGAGAGGGGCTAAAGTTATTGAAGATGAAGTGCTACTCTTGGGGTCATACATGGAAAATCCAGTTATAACAGTATGTCGAGAAAATCTCGGAAAGAATGGGAACGCCTTGAAAGCATTGAATTTATCTCGAAAATTCAGCTTGCCTTCATTAAATGATGAGAGTTTAAGAAGAGCTATATTTGGTGCAGAAAGTACTGGATTTTCGGATAGTGAAGGAACAAACTATACTTTTGGCTTTCACTTTGGTGAATCTGAATACCTTCATTCACAGGATGACAGAAAGCTGTTAGAAATGTTATTTCCTTTTCCCACTATTTTACCTCCATTTCAGGATGAGGTTCCTGTGTCAGAGCTCTTACCTTTCCAGAGAAACAGCAGTCTTATTTCTAGAGTTCTTCGATGGATGCAAAATGACCTAAGAACTACTCCACTTCCTCTTGTTATCATGCAGTACTGTCTAACCGTTTACATTCAGAAACAGGTGGATTATATTGGAGTGAATATGCTGTTAAAGTTAATGAATGAATGGAGATTGATGGATGAGCTCGCGGTGTTGAGAGCTATATATTTGTTAGGTTCAGGTGATTTGCTGCAACACTTTCTGACCGTAATTTTCAATAAGTTAGACAAGGGCGAAGCATGGGATGATGATTTTGAATTAAACACAATATTGCAGGAATCAATCAGAAATTCTTCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGACGATAACCAAAAATAGTGTTGACAATGATGAGCAAGCTAGTACAGGTGGTGCTGCTTTGAGTGCTTCTCGTCAAAGTCATGTCAATAGCTTTGGAATTAATGGCCTTGATATGCTCAAATTCACGTATAAGGTCCCTTGGCCTCTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTAATGCGGTTCTTGTTAAAGGTCAAGCGTGCAAAATTCGTATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTGCTACAAACTACAGAAAGCATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCGTGAACTATGTGAGGGTATGGGTGCAGCAAAATCTCTGGATGAAGTCATTGAAGTCCATGAGACTTACATGTTATCAATTCAACGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTTATTGCTAGCCGCATCAACAGCATCCTTGGCCTAGCTTTAGACTTTTATAACATACAGCAGACATTAAGTGGTGGTGGAGCTGCTTCTGCCATCAAAGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTTCGGGTTTTATCATTCAAATTAAATGTGGGCCACTTCCCTCATCTGGCTGATTTGGTGACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGATGACTGCCTCCAGTTCTGGAAGTGTTACTTCAAGGTTGGGGAAGCCTCCTGGGTAG 3006 0.4102 MGAESQIPRSLIHRIYAPLANEFHFAPPVSSSRTNELELVRGVLRMLQGFSGPLFSWDKSANSFRAKSGVYVSHLSQKSLHSLLNQFIHAATCLQSVAITLDKIESAVPKSPPTLNAFASSASACLQRLRNLALKEETSSSNADGITTPTLLGLTNSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSLPAAELTVHVLDYLHKKLDEMCLVQGGEEEANQMMLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDEAEFWEESYLLRILQHSKLSSEFSSTNYGNDSTTASDYKEMDGRDSVSLSGTIKGKEPSIRDRPACPFFINDLAKSIISAGKSLQLMRYVPNSSVNCTKESNYEGGSAKCLNYGLYPTQRMAGLTLPEIFSVSLVGLLGHGDHVCKYFWQENWYDIVTVSSHASYVNEEKIDKDNNEKLIAPPYLEKTWYKFLIDTLFQKRSADIKLKYEHINNDTLELRGAKVIEDEVLLLGSYMENPVITVCRENLGKNGNALKALNLSRKFSLPSLNDESLRRAIFGAESTGFSDSEGTNYTFGFHFGESEYLHSQDDRKLLEMLFPFPTILPPFQDEVPVSELLPFQRNSSLISRVLRWMQNDLRTTPLPLVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSSDCMLLSAPDSLVVTITKNSVDNDEQASTGGAALSASRQSHVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSATNYRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMGAAKSLDEVIEVHETYMLSIQRQCFVVPDKLGALIASRINSILGLALDFYNIQQTLSGGGAASAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTASSSGSVTSRLGKPPG* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1535 1001 Pfam Gamma tubulin complex component C-terminal 660 976 IPR040457 GO:0043015
Vra5g1535 1001 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 996 - -
Vra5g1535 1001 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 996 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Vra5g1535 1001 Gene3D - 660 975 IPR042241 -
Vra5g1535 1001 Pfam Gamma tubulin complex component N-terminal 40 364 IPR041470 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1535 2 707 Glycosyltransferase AT1G20570 48.261 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1535 K16572 - gmx:100782299 1775.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1535 5 21969712 21977902 Vra5g1535 5 21969712 21977902 ECH