Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1532 ATGCCATCGGTGCATTCTAGTCCGTGTTACCCGATGGAAAACCCGGCTTTGGCATCTTTACTCCGTCACACCACGGGGGAGAGTAAGCGTAGCAGCAAATTCTCCAGCGGAGGAGGCCTTTTGAAAATGTTCAAGTTGTTTCCCATGTTGACTTCTGGATGCAAAATGGTGGCTCTCTTGGGAAGACCTCGGAAAATGCTAAAGGACAGCGCGACCACCGGGACCATCTTCGGTTACCGCAAGGGGAGGGTGAGTTTGGCCATACAAGAGGACACGCGTCAAATGCCCATTTTTCTGATCGAGCTGCCCATGCTGGCCAGTGCTTTGAACAAGGAAATGGCATCCGACATCATGAGGATTGCGTTGGAGAGCGAGACCAAGAGCAGCAGGAAGAAGCTGATGGAAGAGTTCGTGTGGGCGGTCTATTGCAATGGGAGAAAGGTGGGTTACTCCATCAGGCGGAAACAGATGAGCGATGATGAGCTCCACGTGATGCAGCATTTGAGAGGGGTTTCTATGGGAGCAGGGGTGCTCCCCACCGCATCGGATCATAAAGATTCCGACGGAGAAATGACGTACATGAGGGCAAGGTTTGAGAGGGTGGTTGGGTCTAAGGATTCAGAGGCTTTGTACATGATAAACCCAGATGGGGCTCAAGGCCCCGAATTGAGTATCTTCTTTGTTAGACCTCACTAG 696 0.5172 MPSVHSSPCYPMENPALASLLRHTTGESKRSSKFSSGGGLLKMFKLFPMLTSGCKMVALLGRPRKMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLASALNKEMASDIMRIALESETKSSRKKLMEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPTASDHKDSDGEMTYMRARFERVVGSKDSEALYMINPDGAQGPELSIFFVRPH* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1532 231 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 72 229 IPR006460 GO:0010274
Vra5g1532 231 Pfam Protein of unknown function, DUF617 73 229 IPR006460 GO:0010274
Vra5g1532 231 PANTHER - 1 229 - -
Vra5g1532 231 PANTHER PROTEIN MIZU-KUSSEI 1 1 229 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1532 Vra-Chr5 21955241 21956451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1532 - - gmx:100782262 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1532 5 21955241 21956451 Vra5g1532 5 21955241 21956451 ECH