Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1529 ATGGCACAGTTTTCTCTCTCCCCTCCCTCCTTTCCAACTTCTCCTCTCCCACTGCGACGGCGAATCTTATTCGCTCCTCCACCAAGAACCGCCGCCTCTTCCGCCACCGACGCCGTTTCCACTTCCACTTCCTCTTCTGCTTCGAATTACGCGCCCAAAGTCATCGTCACTAGAGAGCGCGGCAAGAACTCCAAGCTCATCGCCGCTCTGGCTAAACATGAAATCAATTGTTTGGAGCTTCCACTCATTGAGCACACGCAGGGACCTGATTTAGACAGGCTTCCTTCTGTATTAGGTGACAATGCATTTGACTGGGTTGTCATAACTTCTCCTGAGGCAGGTTCAGTCTTTCTAGAGGCATGGAGAGCTTCTGGAATGCCTCATGTCAAAATAGGTGTTGTTGGGACTGGCACTGCAAGCATTTTTGAGGAAAGTTTGCAGTCTTCAAACCGATCCCTTGATATTGCCTTTGTGCCATCAAGAGCAACAGGAAAGGTTTTGGCTACTGAGCTTCCTAAGATTGGAAATAAATGCACCGTTCTCTATCCTGCTTCGGCAAAGGCTAGCAATGAGATTGAGGATGGACTTTCAAAGCGTGGATTTGAGGTTACTAGAATGAATACATATACAACGGTTCCAGTTCAACATGTTGACCATATGGTTCTAAAGCTAGCATTTGATGCCCCTGTTCTTACAGTAGCTTCACCATCTGCTATTCGTGCCTGGAAGAATCTTCTTTCAGATTTAGAGTGGAACAATTCTGTTGCATGCATTGGTGAGACAACTGCCGCAATGGCAAGAAGTTTAGGCTTCACTAATGTGTTCTACCCAACACAACCAGGCCTCGAAGGCTGGGTAGAAAGCATTCTGGAAGCATTAGGTTCCTATGATGAATTAAGGTAG 903 0.4684 MAQFSLSPPSFPTSPLPLRRRILFAPPPRTAASSATDAVSTSTSSSASNYAPKVIVTRERGKNSKLIAALAKHEINCLELPLIEHTQGPDLDRLPSVLGDNAFDWVVITSPEAGSVFLEAWRASGMPHVKIGVVGTGTASIFEESLQSSNRSLDIAFVPSRATGKVLATELPKIGNKCTVLYPASAKASNEIEDGLSKRGFEVTRMNTYTTVPVQHVDHMVLKLAFDAPVLTVASPSAIRAWKNLLSDLEWNNSVACIGETTAAMARSLGFTNVFYPTQPGLEGWVESILEALGSYDELR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1529 300 CDD HemD 54 289 IPR003754 GO:0004852|GO:0033014
Vra5g1529 300 Gene3D - 204 293 IPR036108 GO:0004852|GO:0033014
Vra5g1529 300 SUPERFAMILY HemD-like 53 294 IPR036108 GO:0004852|GO:0033014
Vra5g1529 300 Pfam Uroporphyrinogen-III synthase HemD 65 287 IPR003754 GO:0004852|GO:0033014
Vra5g1529 300 Gene3D - 98 203 IPR036108 GO:0004852|GO:0033014
Vra5g1529 300 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 20 297 IPR039793 GO:0004852|GO:0006780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1529 K01719 - gmx:100808086 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1529 5 21918908 21927926 Vra5g1529 5 21918908 21927926 ECH