Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1522 ATGTGGGGATTTGGTGGTAGATATTACTGGGGGAGAAAGGTGGCTTCTGAGAAAGCCGATGGGATAGTTGTGGTGTTTGCATGGATGTCAAGCGAGGAGAAGCACTTGATGAAATACGTGGACCTCTACTCCTCTGTGGGATGGAATTCACTCATTTGTCATTCTCAATTTCTCAACATGTTCTTCCCTGAGAAAGCCACAATTCTTGCTGTTGATATTCTTAATGAACTTGTTGAGGTGCTGAAAATCAGGCAATGCCCCATTGTTTTTGCATCCTTCTCGGGCGGTTCAAAAGCTTGTATGTACAAGATTCTTCAGATAATTAGTGGCAGCTCTGAAGCTCACAATATGGATGACTACCAGCTAGTTAGAGAGTGTATATCTGGCTATATTTATGATTCCAGTCCAGTTGATTTTACCAGTGATTTGGGTGTTAAATTTCTTCTACACCCAACTGTTTTAAAAGTCTCTCATCCACCAAGATTTGCTTCATGGGTTGCAAATGGCATAGCATCTGGTCTTGATTCTCTTTTCCTCAGTAGATTCGAGTCACAGCGTGCAGAATATTGGCAGACACTTTACTCCACCATTAATATGAAGGTCCCTTATCTCATTTTATGTTCAGAAAATGATGATCTTGCTCCTTTTCGAGTCATTTCAAATTTTTTCCAAAGACTAAAGGACCTTGGTGGGGATGTAAAAATGTTAAAATGGAGTGCCTCTCCTCATGTAGGTCACTTTCGGCATCATCCAATAGATTACAAGGCTGCTATCACTGAGATCCTTGGCAAGGCAGTTGCAACTTATTGTTGCAAAAACAGTAGACAAGTAGAAGATGAGAAACTGGGTATAGAAGGAGCAAGAGATGAGATCACAGATCCGTTTTCAGAGTCGCGGAAAGCAGCAATGACCTCGACTAGTTTCCAGGGCTTTGCTCTTGCTCCAAGTGATAGTTTGTCTTCTAGCTCAACGGAGTATGACGTGGGCAAAGATATTGGCACCATAGCAGATGAACGCAAGGAAGGGTATATTCATCTTCCAAGCCGTCCGAGCATCAACGCACACGGGCTTCTTAGCCAAATATTGTTTGATGTTTGTGTGCCTAAGAATGTTGAGGATTGGGATATCAGATCAAGTTCGAGGAATGCTTTGTCAGCTGGTACAGGGAAGCATGTTCCGTTTAATCCTATAAAATGCATGCGGCGTTCAAGGTTGTAA 1218 0.4236 MWGFGGRYYWGRKVASEKADGIVVVFAWMSSEEKHLMKYVDLYSSVGWNSLICHSQFLNMFFPEKATILAVDILNELVEVLKIRQCPIVFASFSGGSKACMYKILQIISGSSEAHNMDDYQLVRECISGYIYDSSPVDFTSDLGVKFLLHPTVLKVSHPPRFASWVANGIASGLDSLFLSRFESQRAEYWQTLYSTINMKVPYLILCSENDDLAPFRVISNFFQRLKDLGGDVKMLKWSASPHVGHFRHHPIDYKAAITEILGKAVATYCCKNSRQVEDEKLGIEGARDEITDPFSESRKAAMTSTSFQGFALAPSDSLSSSSTEYDVGKDIGTIADERKEGYIHLPSRPSINAHGLLSQILFDVCVPKNVEDWDIRSSSRNALSAGTGKHVPFNPIKCMRRSRL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1522 405 PANTHER UNCHARACTERIZED 1 325 IPR008547 -
Vra5g1522 405 Gene3D alpha/beta hydrolase 137 273 IPR029058 -
Vra5g1522 405 PANTHER DUF829 DOMAIN PROTEIN 1 325 - -
Vra5g1522 405 SUPERFAMILY alpha/beta-Hydrolases 124 265 IPR029058 -
Vra5g1522 405 Pfam Eukaryotic protein of unknown function (DUF829) 127 374 IPR008547 -
Vra5g1522 405 Pfam Eukaryotic protein of unknown function (DUF829) 22 107 IPR008547 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1522 Vra-Chr5 21865396 21871286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1522 - - gmx:100810227 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1522 5 21865396 21871286 Vra5g1522 5 21865396 21871286 ECH