Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1516 ATGGAGTCCCGCGGACACTCAAACCCGCTTCTATCGTTTTCCAGCTTCGTCCATCAACACTGCGTCCGTCTCGGGGCCGACCTCACCACTCGTTTGGATGACACAAAGCGAGCCCTAGCTCAAGCTCATCAAAATCTTCTGTCCCCCAAACATGCCATTGCCGCCACTGCCACATTGGGCGCCAATCACGTCGCCAAGTCCCTCATCGGCACCTCTGTTTACACCGTCAGCAATTCCAACAATGAGTTCGTTCTTATCTCCGACGCTGATGGTGCCAAGTCCATTGGATTGCTCTGCTTTCGCCAAGAGGACGCCCAAGCCTTCCTCGCTCAGGTTCGATCAAGTAGCAGAGAACTTCGAAACAAGGCTAGGGTTGTTCCAATTACTCTCGACCAGGTATACATGTTGAAGGTGGAAGGCATTGCATTCCGATTCTTACCTGATCCAGTTCAAATAAAAAATGCTTTGGAGCTCAAACCAGCCAACAAGGGAGGCTTTGATGGAGTTCCTGTTTTTCAGTCTGAACTTTTGGTTGTGAAGAAGAAGAACAAGCGTTACTGCCCAGTGTATTTCTCTAAGGAGGATATTGAGCAGGAACTGTCCAAAGTTTCCAGAGCATCTAGAGCACCTGGTGCTTCTCAGCACATAGTGGTTGCTAGCTTGGAAGATGTACTGAAAAAAATGGAGATGAGTGAAAGGAGTTCAGGATGGGAGGATTTGATTTTTATTCCCCCAGGAAAAAGTCACTCTCAACACATACAAGAAATTACTGAATGA 777 0.4788 MESRGHSNPLLSFSSFVHQHCVRLGADLTTRLDDTKRALAQAHQNLLSPKHAIAATATLGANHVAKSLIGTSVYTVSNSNNEFVLISDADGAKSIGLLCFRQEDAQAFLAQVRSSSRELRNKARVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKPANKGGFDGVPVFQSELLVVKKKNKRYCPVYFSKEDIEQELSKVSRASRAPGASQHIVVASLEDVLKKMEMSERSSGWEDLIFIPPGKSHSQHIQEITE* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1516 258 Gene3D - 72 146 - -
Vra5g1516 258 Gene3D - 147 231 - -
Vra5g1516 258 Pfam Tic22-like family 10 255 IPR007378 GO:0015031
Vra5g1516 258 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 7 256 IPR007378 GO:0015031
Vra5g1516 258 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 7 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1516 - - gmx:100802935 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1516 5 21818853 21822542 Vra5g1516 5 21818853 21822542 ECH