Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1475 ATGAAGCGTCCACATCCGTCAACCTCCGTCCACCGTGACGACACCAGGATGAAGAAGGCCAAGGCGGTGGTGATAGAGAATGGGGAAGAGGAGGAGGTGGAGCCCGTAGAGGGATTAGGACGTTTCGACGATAACCTGCTGTTTGAGGTTTTGAAGCATGTGAACGCGCGTACTCTAGCTATGGCAGGGTGTGTGAACAAGCAGTGGCACGAGACGGCCCAGGACGAGAGGCTGTGGGAACTGATCTGTACGAAGCAGTGGGCGAACACTGGCTGCGGAGAGCAACAGCTAAGATCGGTGGTTCTCGCCCTCGGTGGCTTCCGTCGCCTCCACGCTCTTTATCTCTTTCCCCTTTCCAAGCCTCAGACATCTCTCTCATCTTCATCTTCATCAACCTCCTCCTCTCCTTGGGGTCCCACCATTCCTCAGGTCATTCGATCGAAGCCCCTACGTTTGGGGAAGGACGAGGTTCACCTCTCTCTTTCGCTTCTCTCCATTCGTTACTATGAGAAGATGAATTTCAATAACCGAACTAGATGA 540 0.537 MKRPHPSTSVHRDDTRMKKAKAVVIENGEEEEVEPVEGLGRFDDNLLFEVLKHVNARTLAMAGCVNKQWHETAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHALYLFPLSKPQTSLSSSSSSTSSSPWGPTIPQVIRSKPLRLGKDEVHLSLSLLSIRYYEKMNFNNRTR* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1475 179 PANTHER F-BOX PROTEIN GID2-LIKE 18 174 - -
Vra5g1475 179 PANTHER F-BOX ONLY PROTEIN 48-RELATED 18 174 IPR045118 GO:0019005|GO:0031146
Vra5g1475 179 SUPERFAMILY F-box domain 32 88 IPR036047 GO:0005515
Vra5g1475 179 Gene3D - 29 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1475 Vra-Chr5 21413801 21414760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1475 K14495 - gmx:100527591 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1475 5 21413801 21414760 Vra5g1475 5 21413801 21414760 ECH