Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1464 ATGAAGTCCCAAATGAAGAAAAAGAGAGTAACCCCTATTCCCAATACTCCTTGCAACGCCAGCGATCATATTTGCATCAACCCGGTTTGCTTCTTCTGCAGCATGGGAGAAGCAGATGCATCTCTCAGAAGGGCTGGAATAACGACCTGCTTCAAACAATTATTTCAGGGAGAGAATCATGAACAGCACGTGCTGGTGCTCAGTGGACTGTGGCACATTGCAATGACCCAACCCAGCGACCCAGAGTTCCCTTCCTTCGGAATATTCAAGTGCATGGCAAGTCTAATCCACAAAGGGATAAACGACAGCCACTGGCTTCTCACAAATCAAAACATATACATACCCTATTACGCTGCTCACATCATTGGCTCTTACACGATGAACAAGGAGGAGTTTGCACAACTGGCCGTCCAATCAGGAGTGATACCGCCATTGCTAGACCTTCTCAGGGGGAAGATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACGTTTGAATCAGTAGTACTGCACGAGCAAGAGGTAGTGAAGCTGGCCTTGAACTTGGCTTCCACTTGTTTAGAAGTGGTCTATGTTGACTTCGTAGCTGTGAAGGAAAACAAAAGGCTGGAGTATCACAGAAACTTGCTCACAAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTATCTTCTGAACTGCTTTGCTTGCAAAGATAGGGCTCTGGATCTCATATGCAAGAAGGGGTTTCTCAAGGACTTGTGTGATATGTGGGGAGGGATGATAAATCACACTTCACCAGCAGGGGTTGGACTGATACGAATCTTGTGTTATAGTAAAGAAGGAAGGAAAAACATTGCTCAGTTACCCAAAGTTGTGAATGCTCTAGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATTGATTGTCTCCTTCTCCTTCTCAAGGATCCAGATACGAGGTACAAAGTTCTTGATGTTGCCGTCCCTTACCTGACTGATTTAATTGAACTTAAAAACCTTGGAGATAAATCAAACGTGGGTGAGACCATCACAAAGGTTCTTCTGAATTTGAAACCTAGCAGACAAAAGGTTGGAGCAGTATTGCAAGAAGTGATGGATTTGAAAGTGGATAGGAGGGACCAGGAGAAGGTACTCTCGGAGGAAAACATGGAGGAAGCAAAGGCTTTGGTGAGTTTGATAAAACAACAAGCGAATCACAAGTTCAGGTTGGGAAAGGTTGAAGAAGCTTTGGTGAAATACTCCGAAGCTCTTGGTGTTTGTCCCTTGAAGTTTAGGAAAGAGAGAATGGTGATTTACAGTAACAAAGCTCAGTGTCATATTTTACTGAAGGACGCAGATTCAGCTATCAGTGACTCAACGCGTGCTCTTTGCCTATCCAACCCTGCAAACAGCCATAGGAAAAGCCTTTGGAGAAGATCACAAGCATATGACATGAAAGGAATGGCAAAAGAGAGTCTCATGGACTGCATAATGTTCATGAACAGTAGCATCAAGTCGGGTTGTGAGAACATGCGTGTCAAGATTCCATACCACCCTGCGCGCCTGATCTGCAAGCACATGGATGCCACGTGGCTCTTTGCCACTGCTCGCTCCAGGCTAGAAAAATCAATGCAAGAATTGAACCAAGTTGGCGGGCATGATCAGAACCAAAAGCAACCATGTGATGATAATAAGACCATGATGACGATGATAGAAAATACAAACAGTCACATGCACGGTCTGTCAACCATTATTGAAGAACCTTTCCACGCGAAAGAAGGTGGTGGTAGGAGAAAGATGGAAAGGGCGAGAAGAAGATTGAAGAAAGGTGGTGCGGGCGGAGCAACTTAG 1914 0.4514 MKSQMKKKRVTPIPNTPCNASDHICINPVCFFCSMGEADASLRRAGITTCFKQLFQGENHEQHVLVLSGLWHIAMTQPSDPEFPSFGIFKCMASLIHKGINDSHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQLAVQSGVIPPLLDLLRGKISWVEQRVAVRALGHLASYKSTFESVVLHEQEVVKLALNLASTCLEVVYVDFVAVKENKRLEYHRNLLTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRALDLICKKGFLKDLCDMWGGMINHTSPAGVGLIRILCYSKEGRKNIAQLPKVVNALGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVLDVAVPYLTDLIELKNLGDKSNVGETITKVLLNLKPSRQKVGAVLQEVMDLKVDRRDQEKVLSEENMEEAKALVSLIKQQANHKFRLGKVEEALVKYSEALGVCPLKFRKERMVIYSNKAQCHILLKDADSAISDSTRALCLSNPANSHRKSLWRRSQAYDMKGMAKESLMDCIMFMNSSIKSGCENMRVKIPYHPARLICKHMDATWLFATARSRLEKSMQELNQVGGHDQNQKQPCDDNKTMMTMIENTNSHMHGLSTIIEEPFHAKEGGGRRKMERARRRLKKGGAGGAT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1464 637 Gene3D - 106 378 IPR011989 -
Vra5g1464 637 SUPERFAMILY TPR-like 416 517 IPR011990 GO:0005515
Vra5g1464 637 SUPERFAMILY ARM repeat 106 391 IPR016024 -
Vra5g1464 637 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 1 626 - -
Vra5g1464 637 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 1 626 - -
Vra5g1464 637 SMART arm_5 129 170 IPR000225 GO:0005515
Vra5g1464 637 MobiDBLite consensus disorder prediction 613 637 - -
Vra5g1464 637 Gene3D Tetratricopeptide repeat domain 383 530 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1464 Vra-Chr5 21326056 21329088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1464 - - gmx:100777591 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1464 5 21326056 21329088 Vra5g1464 5 21326056 21329088 ECH