Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1445 ATGGTGTTTGGGCAAGTAGTAGTTGGGCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTTCTAAGTCTCATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCCGCTAATGATTCATTACCCTACGAATGTGCTGTGAACATTGAGGATCTTGTGAAATTAAGTGATGTAATGGTGGAACATTCACTTGGTCCAAATGGGGGTCTTGTGTACTGCATGGATTATCTTGAGAAAAATATCGACTGGTTGGAAGCAAAATTGGAACCTCTTTTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTCTTTTTCCTTCATTCAAATGCCAAGAATGTCCTCATGAAGCTCGTAAAGAAATTGAACCTAAGGTTAACTGCAATGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAATATATCAGTGCATTGCTTTTATCCTTGTCCACGATGCTACATCTAGAACTCCCTCACATAAATGTCTTGTCTAAAATTGATTTAATTGAGAGCTACGGAAAGCTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCGTATTTACAACACCATCTTGATCAAGATCCTCGCTCTGCTAAGTACAGAAAACTGACAAAGGAACTATGTGAAGTTATTGAGAACTTCAGTCTTGTGAGTTTTACAACCTTAGATATTCAGGACAAAGAGAGTGTGGGGAATTTGGTGAAGCTGATAGACAAATGCAATGGGTACATATTCACCGGTATAGAAGCAAGTGCAGTTGAATTTAGCAAGCTTGCAGTTGGTCCTGTTGATTGGGATTATTATAGAGTTGCAGCAGTGCAAGAGAAGTACATGAAGGATGATGAAAATATTGATGATAATGAATGA 906 0.3951 MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVLMKLVKKLNLRLTAMHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQHHLDQDPRSAKYRKLTKELCEVIENFSLVSFTTLDIQDKESVGNLVKLIDKCNGYIFTGIEASAVEFSKLAVGPVDWDYYRVAAVQEKYMKDDENIDDNE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1445 301 CDD GPN2 3 252 - -
Vra5g1445 301 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Vra5g1445 301 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 294 IPR004130 -
Vra5g1445 301 Gene3D - 4 265 IPR027417 -
Vra5g1445 301 PANTHER GPN-LOOP GTPASE 2 1 294 IPR030231 -
Vra5g1445 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1445 Vra-Chr5 21153821 21158727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1445 K24104 - gmx:100781338 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1445 5 21153821 21158727 Vra5g1445 5 21153821 21158727 ECH