Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1435 ATGAAGAAACAGGGAGTGGTCAGTATTGGGTTTGCGACACTCACAGAGGTTGTCGTTATGATGTTGTCAGTGGTATGCACGTGCGGGGCCAGCACAAGCGGGAACCTGCACCCATTGATTCTAGTACCTGGTAACGGAGGGAACCAGCTAGAAGCCAAGTTGAACAGAGAGTTCAAGCCATCCAGTTTCATCTGCGAATCATGGTACCCTCTTGGGAAGAAAAACCAAGGCTGGTTCAGACTCTGGTTTGATTCCAGTGTCATTCTTGCACCTTTCACTCAATGCTTTGCTCAACGCATGACCCTTCACTACCATCCACAACTCGATGATTACTTCAACACCCCTGGAGTTCTCACTCGGGTCCCTCACTTCGGTTCCATCAATTCCCTTCTTTATCTCAATCCTCATCTCAAGCATATTACCGAATACATGGCATCCCTGGTGGATTCATTGCAAAAGCTTGGTTATGCTGATGGTGAGACTCTATTTGGTGCCCCCTATGACTTTCGATATGGTCTAGCTGCTGAAGGTCATCCCTCACAAGTGGGTTCCAAGTTCCTAAAAGACCTAAAGAAATTGATAGAAGAAGCAAGCGCTTCCAACGGTGGGAAGCCAGTGATACTGGTATCCCACAGTTTAGGAGGTTTATTTGTCCTACAACTTCTAATTCGAAACCCCCCTTCTTGGCGTGAAAAATTCATCAAACACTTCATTGCTCTTTCAGCTCCATGGGGTGGTGCTGTAGACGAAATGTTCACCTTTGCATCTGGCAACACTCTAGGAGTGCCCCTGGTTGACCCTTTGCTAGTGAGGGGTGAACAAAGAAGCTCCGAGAGTAACCTTTGGCTTTTGCCTAACCCCAAAATATTTGGTCCTCAAAATCCAATTGTGATCACTCCAAATAAGACCTATTCCGCACATGACATGGTTGATTTTCTCAAAGACATTGGTTTTCCCGAAGGGGTTTACCCTTACGAAACACGCATTGTACCCTTGATAGGGAACATTCCAGCGCCACACGTGCCTATAACTTGTATCATGGGAACAGGAGTGAGAACCTTGGAAAGTTTGTTTTATGAGAAAGGTGATTTTGATGAGCGGCCTGAAATTTCATATGGGGATGGTGATGGAACGGTGAACTTGGTGAGCTTGTTGGCGCTTCAATCACTATGGAAAGATGAGAAAAATCAATACCTTAAACTGGTTAAGATAGATGGTGTGTCGCATACTTCAATACTCAAAGACGAAGTTGCGCTTAATGAAATTGTTCGTGAGATTACTGAAATTAACTCTCATGCTCACCTTTTCGGGGTAAATGATGTTTGA 1326 0.4502 MKKQGVVSIGFATLTEVVVMMLSVVCTCGASTSGNLHPLILVPGNGGNQLEAKLNREFKPSSFICESWYPLGKKNQGWFRLWFDSSVILAPFTQCFAQRMTLHYHPQLDDYFNTPGVLTRVPHFGSINSLLYLNPHLKHITEYMASLVDSLQKLGYADGETLFGAPYDFRYGLAAEGHPSQVGSKFLKDLKKLIEEASASNGGKPVILVSHSLGGLFVLQLLIRNPPSWREKFIKHFIALSAPWGGAVDEMFTFASGNTLGVPLVDPLLVRGEQRSSESNLWLLPNPKIFGPQNPIVITPNKTYSAHDMVDFLKDIGFPEGVYPYETRIVPLIGNIPAPHVPITCIMGTGVRTLESLFYEKGDFDERPEISYGDGDGTVNLVSLLALQSLWKDEKNQYLKLVKIDGVSHTSILKDEVALNEIVREITEINSHAHLFGVNDV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1435 441 Pfam Lecithin:cholesterol acyltransferase 79 314 IPR003386 GO:0006629|GO:0008374
Vra5g1435 441 Gene3D alpha/beta hydrolase 362 428 IPR029058 -
Vra5g1435 441 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 18 431 - -
Vra5g1435 441 PANTHER BCDNA.GH02384 18 431 - -
Vra5g1435 441 Gene3D alpha/beta hydrolase 86 279 IPR029058 -
Vra5g1435 441 SUPERFAMILY alpha/beta-Hydrolases 33 426 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1435 Vra-Chr5 21075393 21077133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1435 17 440 Acyl Lipid Metabolism Gene Families AT1G27480 60.748 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1435 - - gmx:100804027 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1435 5 21075393 21077133 Vra5g1435 5 21075393 21077133 ECH