Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1426 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAGGACACCCACAGGGGAACTCCTGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTGGAACTGGAAGGTCCCGAAGAAGATGACTTAATGACACCAACTTCTCCTACGGGTGTTTCACGAGACAAAGGAAAAGGAAGAGGCAAAAATGCGAAACAACTCACCTGGGTTCTTCTCCTCAAAGCACACCGCGCCGCCGGTTGCCTGACCTCCCTGGCGCCGGCATTGTGGGGGCTCGTCGCCGCCGTGAAGCGCCGCGTCGCCGCCGGAAAAACCGATGCCGACACCGATGGCGGGAGAGAGCTGGAGAACCCCACCGTGAAGACGCGTTTCTATTTCTGCATCAAGGTTTTTCTGTGGCTTTCCGTTTTTCTCTTGTTTTTCGAGGTTGCTGCGTACTTCAAAGGGTGGCATTTCGTTGCGGCGAGGATTCAGTTGGAGCACTTTCTGTGGGTACCCGCTTTTGGACTCAAGGATTTCTTCGTTTGGTTCTACGCGAGATGGGTTTTTGTTCGCGTGGAGTATCTCGCTCCTCCCCTGCAGTTTCTAACCAATGCGTGCATCGTGCTTTTCCTTATTCAGAGTGTGGATAGACTTGCTCTGTGTTTGGGGTGTTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTTCCTAAAAGTGGGGATGCAATTGTAGATCTTGAATCTGGAGAAAGCAAGGGTTTTTCTTTTTTCCCAATGGTTCTTGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGGTGCGGTGTGTAATTTGGATTGGCCGAAGGGGAAGTTGTTGATTCAGGTTTTGGATGATTCCGATGACCCAACGACGCAGTTGCTAATAAAGCAGGAGGTTCATAAGTGGCAACAAGAGGGTGCCAACATTTTGTACCGGCATCGCGTGATTAGAGATGGGTACAAGGCCGGGAATTTGAAATCCGCTATGAATTGTAGCTACGTTAAAGATTATGAGTTTGTTGCAATTTTTGATGCAGATTTTCAGCCTACTCCAGATTTTCTAAAAAAAACGGTTATTCACTTTAAGGATAATGATGAATTGGGGCTTGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTCCTAACGAGGTTGCAGTACATTAACCTGTCTTTTCATTTTGAGGTAGAGCAGCAAGTGAATGGGGTTTTCCTTAACTTCTTTGGGTTCAATGGAACTGCTGGAGTTTGGAGGATAAAGGCTTTGGAGGAATCTGGTGGTTGGTTGGAGAGAACTACTGTTGAGGACATGGACATTGCCGTTCGAGCTCATCTTTATGGCTGGAAATTCATTTTCCTCAATGATGTTGAGTGCCAATGTGAGATACCGGAATCTTACGAAGCTTACAGGAAACAGCAGCACAGATGGCATTCTGGGCCAATGCAGTTGTTCCGCCTTTGTTTGCCTGATATTATTCAGTCCAAGATAAGTGTGTGGAAGAAATTCAACATGATATTTCTCTTCTTCCTTCTTAGAAAGCTGATCTTACCATTCTATTCGTTCACCTTGTTTTGTATAATTCTACCTATGACAATGTTCGTGCCGGAGGCTGAGCTTCCTGCGTGGGTTGTGTGTTACATCCCTGCTGCCATGTCCTTTCTCAACATTCTTCCGGCTCCGAAGTCCTTTCCCTTCATTGTCCCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAGTTCAATGCCATGATCTCAGGCCTGTTCCAGCTAGGTAGTGCATACGAGTGGGTGGTCACTAAGAAATCTGGTCGTTCTTCTGAAGGTGATTTGGTTTCATTGATTGAGAAAGGACCAAGGCTTCAAAGAGGGTCCTCAGCACCTGATCTTGAGGAAATAAAAGAGGAACTTAAAAGGCAGGAGGAGAAGACCTCTAAGAAGAAGAAAAAGCATAACAGAATATATATGAAGGAACTTGCTTTGGCCTTTCTACTCCTAACAGCCTCAGCAAGGAGTCTCCTATCAGCACAAGGGATCCATTTCTACTTTTTGTTATTCCAGGGAATATCATTCCTCTTGGTTGGTCTTGACTTGATTGGTGAACAGGTGGACTGA 2130 0.462 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEDDLMTPTSPTGVSRDKGKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALWGLVAAVKRRVAAGKTDADTDGGRELENPTVKTRFYFCIKVFLWLSVFLLFFEVAAYFKGWHFVAARIQLEHFLWVPAFGLKDFFVWFYARWVFVRVEYLAPPLQFLTNACIVLFLIQSVDRLALCLGCFWIRFKKIKPVPKSGDAIVDLESGESKGFSFFPMVLVQIPMCNEKEVYQQSIGAVCNLDWPKGKLLIQVLDDSDDPTTQLLIKQEVHKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVIHFKDNDELGLVQARWSFVNKDENLLTRLQYINLSFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLYGWKFIFLNDVECQCEIPESYEAYRKQQHRWHSGPMQLFRLCLPDIIQSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPRLQRGSSAPDLEEIKEELKRQEEKTSKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1426 709 Pfam Glycosyl transferase family group 2 343 538 IPR001173 -
Vra5g1426 709 PANTHER - 11 708 - -
Vra5g1426 709 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 11 708 - -
Vra5g1426 709 MobiDBLite consensus disorder prediction 37 58 - -
Vra5g1426 709 Coils Coil 632 659 - -
Vra5g1426 709 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 467 IPR029044 -
Vra5g1426 709 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 527 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1426 Vra-Chr5 20983667 20987260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1426 4 709 Miscellaneous Gene Families AT4G07960 76.912 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1426 - - gmx:100805969 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1426 5 20983667 20987260 Vra5g1426 5 20983667 20987260 ECH