Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1407 ATGGAGAACGGGGATAACATTCTGGATGTCATATACGAGGAGGGTGATTTAGATTACATAGATGGCGATGTTGAAATGGCTGATCTTGAAGAAGGGGAGTTGGTGGAGCCAGATTCCAAAAACGTTTTGGGACAAAGCAGTGCCGGAGATGTCAATGAAGCAAATCAAGAACCTCTCATTAAGAACCGCAGGCGCAGAGCCAATAAGAAAAAGAATAAGAAGAAAAGGAAGGGTTCAGGATCTAATGCCACGGACATAGACAGATTTGTGTTAGATACATGTCGGCGACTGAAAGAGAAAAAGTCATACATGGTATACACTGCTGTGGGCTGCCTTGGGATCTCTGCATTAAGTGATCTTGTCAGTGAGGTGGATGCAATACAGGCTTGTGGAGGCCAGAAAACGGCTGATGGTAGACGATTCCGGACAGGGGGTGGCATATTGTGGAGCATCTTAAAAGTTAGGGAACCGAAGGTCTTTAAAGAGATAATGAAAAAAACAAAGGAGTTTGAGAAACAGTTCAAGCAGCCTAATGTGACGCAACGACCTGTGCCAAAGAAAGACGATTCTTCTCAAGGAGTGCCCGTTTCATTTTCTGGCAGGGATCAGGGCAATGTTTTGGGTAGTGATTTTCATGTTTCCCAGCTGCAAAATAAACATGAACCGGCACCTTCTGAAGAAAAACCTATATCTGTGCATGATAGGTTAAGGATACCAGTATCATATGATGATGATCTGCTGGGAGAGAATCCAGTCAATGATGCAACCTGA 771 0.4397 MENGDNILDVIYEEGDLDYIDGDVEMADLEEGELVEPDSKNVLGQSSAGDVNEANQEPLIKNRRRRANKKKNKKKRKGSGSNATDIDRFVLDTCRRLKEKKSYMVYTAVGCLGISALSDLVSEVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVFKEIMKKTKEFEKQFKQPNVTQRPVPKKDDSSQGVPVSFSGRDQGNVLGSDFHVSQLQNKHEPAPSEEKPISVHDRLRIPVSYDDDLLGENPVNDAT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1407 256 MobiDBLite consensus disorder prediction 176 220 - -
Vra5g1407 256 MobiDBLite consensus disorder prediction 221 236 - -
Vra5g1407 256 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 90 169 IPR019385 -
Vra5g1407 256 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 247 IPR039047 GO:0006408
Vra5g1407 256 MobiDBLite consensus disorder prediction 63 77 - -
Vra5g1407 256 MobiDBLite consensus disorder prediction 174 236 - -
Vra5g1407 256 Gene3D - 80 178 IPR038092 -
Vra5g1407 256 MobiDBLite consensus disorder prediction 33 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1407 Vra-Chr5 20783802 20790877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1407 K14291 - gmx:100793038 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1754 6 33747152 33752716 Vra5g1407 5 20783802 20790877 PCT