Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1391 ATGACGGACCAGTCCTCCAAGCCCAACGGAAACGCCGCAATTAACGGCACCGCCGCCACTAACGGCAATTCCGCTCCCGTCAAGTCCCAACTCTACAATCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGCCAGCGCTCCCACCGCAACCTCTGCTGCTGCTGCTGCTTCTGGACCATCCTCACCGTCCTCGCCGTCGCGCTCCTCGCTGCCATTGTCGGCGCCGCACTGTACGTACTGTACCGCCCGCACCGTCCCGAATTCTCCGTCACCAACCTCCGCATTGTCAAGATGAACCTCACCTCTTCCGCCGACTCTCCCTCGCACCTCGTCACGCTCTTCAACCTCACTCTCATCGCCAAAAACCCCAACAACCACCTTATTTTCTTCTACGACCCCTTCGCCGTTACGGTCTTCTCCAACTCCGTCCCCGTCGGGAACGGCTCCGTTACGGCCTTTACCTCCGACAAAAACAACCAGACGAGCCTCCGCGCCGTGCTGTCCGGTTCGCAAGATCTGGACACTGATTCCTTGACTAACCTGAGATCGGGTCTGAAGATGAAGAAGGGTTTCCCCGTTGAGATACAGATGGATACCAAGGTGAAGATGAAGATGGATTGGCTCAAGAGCAAGAAGGTGGGAATTCGAGTAACGTGCGACGGAATCAGAGGAACGGTTCCCGCCGGCAAGTCTCCGGCAGTGGCTTCCGTCGTGGACTCCGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTTTCCTTTTAA 783 0.567 MTDQSSKPNGNAAINGTAATNGNSAPVKSQLYNPNRQVYRPQSHYHRRGQRSHRNLCCCCCFWTILTVLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIVKMNLTSSADSPSHLVTLFNLTLIAKNPNNHLIFFYDPFAVTVFSNSVPVGNGSVTAFTSDKNNQTSLRAVLSGSQDLDTDSLTNLRSGLKMKKGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIRGTVPAGKSPAVASVVDSECKVDLRIKIWKFSF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1391 260 PANTHER HARPIN-INDUCED PROTEIN 6 259 - -
Vra5g1391 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 259 - -
Vra5g1391 260 Gene3D - 84 223 - -
Vra5g1391 260 MobiDBLite consensus disorder prediction 1 29 - -
Vra5g1391 260 SUPERFAMILY LEA14-like 73 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1391 Vra-Chr5 20658261 20659555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1391 34 253 EF-hand Containing Proteins AT5G21130 30.263 3.54e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1391 - - gmx:100775320 468.388