Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1384 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACTCTGGCAACCGGCAAATCTTCAGCGACGCTGCGATTCAATTGGGCAATGAACTGGTAAAGAGGAACTTAGACTTGGTGTATGGTGGTGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTCTATGATGGAGGCTGCCATGTCCTGGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTTGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATACGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGGAATATTGTTGTCTCTGCTACTTCTGCTAAAGAACTTATGATGAAGATGGAGCATTACAGTCCTTCGCACGAACATGTTGCCCCTCATGAGAGCTGGCAGAAGAAGCAATTAGGTGATTATCCAGATGGTGAGTGA 642 0.4579 MEEGYPRSKFKTVCVFCGSNSGNRQIFSDAAIQLGNELVKRNLDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSATSAKELMMKMEHYSPSHEHVAPHESWQKKQLGDYPDGE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1384 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 205 - -
Vra5g1384 213 SUPERFAMILY MCP/YpsA-like 9 188 - -
Vra5g1384 213 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Vra5g1384 213 MobiDBLite consensus disorder prediction 192 213 - -
Vra5g1384 213 PANTHER LOG FAMILY PROTEIN YJL055W 8 205 - -
Vra5g1384 213 Gene3D - 9 204 - -
Vra5g1384 213 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1384 Vra-Chr5 20593879 20596521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1384 K22522 - gmx:100785484 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1714 6 33344327 33347023 Vra5g1384 5 20593879 20596521 PCT