Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1383 ATGTGGGAATCAATTGTTTTGACGGTGGTTGCCACCGCCGGCAACAACATCGGCAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTCAAGTTCAAGGTCATAAGGGCATATGCTTTGAATAAAACCTGGCTCGTAGGTTTTCTGATGGATATATTTGGGGCACTGTTGATGTTAAGGGCATTAGCTCTGGCTCCTGTCTCTGTCATCCAACCAGTTTCTGGGTGTGGACTGGCAATTCTTTCGGTCTTTTCTCATTTTTATCTCAAGGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTCGCAGGTTTCGGTACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGGGGCTGCTGCTCTATCTATATTTCACATACCGTGGCTGGCATTTGTTGTTTTCATCTTGTTTATAATGCTTAATGGATGGCTTCGAATATGTAGGCGTAATCGAAGAGAACACGAGATGGTTGAATATGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTCCTGTTCCTGGAGCAAGGCTTCCCCAAGCTGTTGGTTCCTATATGCATAATCGTAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACACGGAAGGGCTATTATAGTTTCTACATGCGCAGCTGTGGCATCAATATTGACTGGTGTACTAGCTGGGATGCTTGCTTTGGGTGAGCGACTTCCTTCGGCACCAAAAGCTCGCATGTTACTCCTTCTAGGATGGCTACTTATTATTGTTGGGGTGATTTTACTTGTTGGTTCAGAAAAGCTAGTAAAATTCTTTCGATTGTCTTCACACCGCTTTAAAAGAAGCACCGTTGATAAAAGCTACGGCCATAGAAGATCTGCAACTTCACGTATTAGGGAACCTAGCCCAACTGCTGTCATTCAAGCGGCGACTGTAAATCATTTACTGTAA 1011 0.4382 MWESIVLTVVATAGNNIGKILQKKGTVILPPLSFKFKVIRAYALNKTWLVGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITFAGFGTIGVGAGGEEQGAAALSIFHIPWLAFVVFILFIMLNGWLRICRRNRREHEMVEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIIVSVCSSGTGFYYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGERLPSAPKARMLLLLGWLLIIVGVILLVGSEKLVKFFRLSSHRFKRSTVDKSYGHRRSATSRIREPSPTAVIQAATVNHLL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1383 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 286 - -
Vra5g1383 336 Pfam Magnesium transporter NIPA 39 284 IPR008521 GO:0015095|GO:0015693|GO:0016021
Vra5g1383 336 Gene3D - 3 118 - -
Vra5g1383 336 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 336 - -
Vra5g1383 336 PANTHER UNCHARACTERIZED 1 336 IPR008521 GO:0015095|GO:0015693|GO:0016021
Vra5g1383 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1383 Vra-Chr5 20587448 20591529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1383 - - gmx:100803982 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1713 6 33337417 33342873 Vra5g1383 5 20587448 20591529 PCT