Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1378 ATGAACGAACCCACGACAAAACGCCGTAAGAAGAACGATGAGGGGTCAACCCGTAAGACGAAGAAGAAGAGAGAACTGAAGGGTGTTCTCAGAACAATCCTGTTCTTGGATGGAAAAGAGAAAGACGAAGAAGAAAAACAACAGGGCATGATCGATGGTTACTACAGCGAGGTGGAAGAGTCCAATCCGAGAAAGAGAAGCAAAGTCGGCGGAGCCGGAGGTGACTCGGTGAGTCACCGACGAGTTTGGGTGAAGGAACGTTCGGGGGCGTGGTGGGAGGAGTGTAACAAAGCCGAATTTCCGGAAGAAGAGTTCCGGAAAGCGTTCAGAATGGGAAGGGTGACTTTCGAAGCGATTTGCGAGGAGCTGAATTCTGTGATTGCGAAGGAGGACACAACGCTGCGAAACGCCATTCCGGTGAAGCAAAGGGTGGCGGTTTGTTTGTGGCGGTTGGCCACCGGCGACCCTCTGAGCGTGGTTTCGAAAAGGTTCGGTTTGGGGATATCCACTTGCCACAAACTGGTTCTTGAGGTTTGCACTGCCATAAAGAGAGTGCTTATGCCAAAGTATTTGCAATGGCCTAATGCTGTTATTTTGAGGGACATCAAGGGTGAGTTTGAGAACGTTTCTGGGATCCCCAACGTTGTGGGATCCATGTTCACTTCTCATGTTCCCATCATAGCTCCTAAGATGAGTGTCTCTGCTTACTTCAACAAGAGGCACACTGAGAGGAACCACAAGACTTCATATTCTGTGACTGTTCAGGGTGTTGTCGACCATAGAGGGGTTTTCACCGATGTGTGCATTGGGTGGCCTGGTTCGATGGGTAATGACCAGGTGTTGGAAAAGTCGGCACTTTTTCAGAGGGCTAATAATGGTGGACTTAATCTCAGTGGGGTTTGGATTGTTGGGGGTTCCGGGTACCCTTTGTTGGATTGGGTTCTGGTGCCTTATAAGCAGCAGAATCTCACTTGGACTCAGCATGCTTTCAATGAGAAGATTGGGGGAGTTCGGAGGGTTGCTAAGGATGCATTTGGGAGGTTGAAAGGAAGGTGGGGGTGCTTGCGAAAGAGGACTGAGGTGAAGCTGCAAGATTTGCCTCTTGTGCTCGGGGCTTGTTGTGTTTTGCATAATATATGTGAGTTGAAGAATGAGGAAATGGATCCTGAGTTGTTGAAGATTGATGATGATGTTGTTGACGATGACGATGATGATGATTTGGTGGTGGAGCCAGAGGTTCCCTTGAGATCTGTTAGCTCCTTGAAGGCTAGGGATGCAATTGCGCATAACCTTTTGCACCATGGACTAGCTGGCACTTCTTTTCTTTGA 1329 0.4883 MNEPTTKRRKKNDEGSTRKTKKKRELKGVLRTILFLDGKEKDEEEKQQGMIDGYYSEVEESNPRKRSKVGGAGGDSVSHRRVWVKERSGAWWEECNKAEFPEEEFRKAFRMGRVTFEAICEELNSVIAKEDTTLRNAIPVKQRVAVCLWRLATGDPLSVVSKRFGLGISTCHKLVLEVCTAIKRVLMPKYLQWPNAVILRDIKGEFENVSGIPNVVGSMFTSHVPIIAPKMSVSAYFNKRHTERNHKTSYSVTVQGVVDHRGVFTDVCIGWPGSMGNDQVLEKSALFQRANNGGLNLSGVWIVGGSGYPLLDWVLVPYKQQNLTWTQHAFNEKIGGVRRVAKDAFGRLKGRWGCLRKRTEVKLQDLPLVLGACCVLHNICELKNEEMDPELLKIDDDVVDDDDDDDLVVEPEVPLRSVSSLKARDAIAHNLLHHGLAGTSFL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1378 442 Pfam DDE superfamily endonuclease 221 378 IPR027806 -
Vra5g1378 442 PANTHER UNCHARACTERIZED 44 441 IPR045249 -
Vra5g1378 442 MobiDBLite consensus disorder prediction 1 25 - -
Vra5g1378 442 PANTHER NUCLEASE 44 441 - -
Vra5g1378 442 MobiDBLite consensus disorder prediction 41 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1378 Vra-Chr5 20545432 20547158 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1378 - - gmx:100794826 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1378 5 20545432 20547158 Vra5g1378 5 20545432 20547158 ECH