Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1372 ATGGAAGGGATGATGCAGCTTGCGTATGATGCAACGGTGAAGCTCATGCTGTCTGCACTTGAGCGCAACCTACTCCCTGACGCCGTCACCAGGAGACTCACGCGCCTCCTTTTGGCTACTCGCCTTCGCTCTTCTTCCACCACATACTCGGAGCTTCAGCTTTTCAACCTCCTCCACTTCGCACATTCTTTACGAGAGATGCCCATAGCAATCAACACCGAGAAGCCAAAATCTCAACATTATGAACTACCAACCGCTTTCTTCAAGCTCGTCCTTGGAAGCAATCTCAAATACAGCTGTTGCTATTTCTCTTCTGCCTCAACGACGCTGGAAGATGCTGAAGAAGCAATGTTGAAACTGTACTGCGACAGATCAAACCTGAAAGATGGTCATACGGTACTCGATGTGGGATGTGGTTGGGGATCGCTGGCATTATACATTGCCAAGAAGTACATTAACTGCAGAGTTACAGGAATCTGCAATTCCACAACTCAAAAGGCTTACATTGAGGAAAAGTGCCGGGATCTTCAGCTGCAAAATATCAATATTATAGTTGCTGATATTAGCACGTTTGAAATGGAGGCTTCTTACGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTACAAAGACCTTCTGAAGAAGATATCCAAATGGATGAAAGAAGATNGCCTTTTATTTGTGNATTACTTCTGCCACAAAGCATTTGCCTACCACTTTGAGGACAAAAATGAAGATGACTGGATTACAAGATACTTCTTTACTGGAGGAACCATGCCTTCAGCAAATCTACTTCTTTATTTTCAAGATGATGTTACAGTCATCAACCATTGGCTGGTAAATGGTAAACACTACGCACAGACCAGTGAAGAATGGCTGAAAAGGATGGACCAGAGAATGACTTACATCAAGCCAATTATGCAATCAACGTATGGCAATGATTCAGCTACCAAGTGGATTGCCTATTGGAGAACATTCTTCATAGCTGTGGCGGAACTTTTCGGATATAATAACGGTGAAGAATGGATGGTTGCACACTTTCTTTTCAAAAAGAAATGA 1068 0.426 MEGMMQLAYDATVKLMLSALERNLLPDAVTRRLTRLLLATRLRSSSTTYSELQLFNLLHFAHSLREMPIAINTEKPKSQHYELPTAFFKLVLGSNLKYSCCYFSSASTTLEDAEEAMLKLYCDRSNLKDGHTVLDVGCGWGSLALYIAKKYINCRVTGICNSTTQKAYIEEKCRDLQLQNINIIVADISTFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDXLLFVXYFCHKAFAYHFEDKNEDDWITRYFFTGGTMPSANLLLYFQDDVTVINHWLVNGKHYAQTSEEWLKRMDQRMTYIKPIMQSTYGNDSATKWIAYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1372 355 Gene3D Vaccinia Virus protein VP39 71 349 IPR029063 -
Vra5g1372 355 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 4 355 - -
Vra5g1372 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 350 IPR029063 -
Vra5g1372 355 Pfam Mycolic acid cyclopropane synthetase 77 311 - -
Vra5g1372 355 CDD AdoMet_MTases 132 234 - -
Vra5g1372 355 PANTHER - 4 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1372 Vra-Chr5 20491382 20494517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1372 78 337 Acyl Lipid Metabolism Gene Families AT3G23510 29.057 5.56e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1372 - - gmx:100818389 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1372 5 20491382 20494517 Vra5g1372 5 20491382 20494517 ECH